Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.278798
D7Ertd462e
DNA segment, Chr 7, ERATO Doi 462, expressed
7
7 5.5 cM
52132
Human Homolog
MGC20255[hypothetical protein MGC20255]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 40 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGATGCTGG (
15
)
13.1
0.0131
P8 Cb GC
TGTCCTCATT
(
7
)
1.6
0.0016
Cb medulloblastoma
CCTCCCAACC
(
4
)
4.6
0.0046
Cb medulloblastoma
TGGATGCTGG (
15
)
4.6
0.0046
Cb medulloblastoma
CTCAGCATCC (
4
)
2.3
0.0023
P8 GC+1d culture
TGGATGCTGG (
15
)
8
0.008
P8 GC+1d culture
CTCAGCATCC (
4
)
1.1
0.0011
P8 GC+1d culture
TGTCCTCATT
(
7
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGATGCTGG (
15
)
2.3
0.0023
P8 GC+SHH+1d culture
CTCAGCATCC (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TGTCCTCATT
(
7
)
1.2
0.0012
3T3 fibroblasts
TGGATGCTGG (
15
)
3.5
0.0035
E15 cortex
TGGATGCTGG (
15
)
14.8
0.0148
E15 cortex
CCTCCCAACC
(
4
)
4.9
0.0049
Hypothalamus
TGGATGCTGG (
15
)
5.4
0.0054
Hypothalamus
TGTCCTCATT
(
7
)
1.8
0.0018
E12.5 retina
TGGATGCTGG (
15
)
5.6
0.0056
E14.5 retina
TGGATGCTGG (
15
)
18.2
0.0182
E14.5 retina
TGTACTCATT (
2
)
1.8
0.0018
E14.5 retina
TGTCCTCATT
(
7
)
1.8
0.0018
E16.5 retina
TGGATGCTGG (
15
)
30.8
0.0308
E16.5 retina
TGTACTCATT (
2
)
1.8
0.0018
E16.5 retina
TGTCCTCATT
(
7
)
1.8
0.0018
E18.5 retina
TGGATGCTGG (
15
)
1.8
0.0018
P0.5 retina
TGGATGCTGG (
15
)
7.9
0.0079
P0.5 retina
TGTCCTCATT
(
7
)
3.9
0.0039
P2.5 retina
TGGATGCTGG (
15
)
15.8
0.0158
P2.5 retina
TGTCCTCATT
(
7
)
1.8
0.0018
P4.5 retina
TGGATGCTGG (
15
)
5.9
0.0059
P4.5 retina
TGTCCTCATT
(
7
)
4
0.004
P4.5 retina
TGTACTCATT (
2
)
2
0.002
P6.5 retina
TGGATGCTGG (
15
)
6.7
0.0067
P6.5 retina
TGTCCTCATT
(
7
)
3.3
0.0033
P10.5 crx- retina
TGGATGCTGG (
15
)
5.6
0.0056
P10.5 crx- retina
TGTCCTCATT
(
7
)
3.7
0.0037
P10.5 crx+ retina
TGGATGCTGG (
15
)
5.8
0.0058
P10.5 crx+ retina
TGTCCTCATT
(
7
)
1.9
0.0019
Adult retinal
TGGATGCTGG (
15
)
5.6
0.0056
Adult retinal
TGTCCTCATT
(
7
)
1.9
0.0019
ONL
TGTCCTCATT
(
7
)
1.9
0.0019
