Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.278865	Stxbp1	syntaxin binding protein 1	2	2 B	20910
Gene Ontology	mitochondrion | protein binding | protein transport | protein transporter activity | synaptic vesicle maturation | vesicle-mediated transport
Human Homolog	STXBP1[syntaxin binding protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 73 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGGGTTTCC 24.5 0.0245 P8 Cb GC AGAGCCATTG 1.6 0.0016 P8 Cb GC CAAGCTCCAC 1.6 0.0016 Cb medulloblastoma TGGGGTTTCC 48.6 0.0486 Cb medulloblastoma GTGCCTGGGC (2) 4.6 0.0046 Cb medulloblastoma AGAGCCATTG 2.3 0.0023 P8 GC+1d culture TGGGGTTTCC 30.8 0.0308 P8 GC+1d culture CTGCTCACCC 13.7 0.0137 P8 GC+1d culture GTGCCTGGGC (2) 5.7 0.0057 P8 GC+1d culture CAAGCTCCAC 2.3 0.0023 P8 GC+1d culture GCTCACCTCG 2.3 0.0023 P8 GC+SHH+1d culture TGGGGTTTCC 28.1 0.0281 P8 GC+SHH+1d culture GTGCCTGGGC (2) 2.3 0.0023 P8 GC+SHH+1d culture CTGCTCACCC 1.2 0.0012 P8 GC+SHH+1d culture GCTCACCTCG 1.2 0.0012 3T3 fibroblasts GTGCCTGGGC (2) 3.5 0.0035 E15 cortex GCTCACCTCG 9.9 0.0099 E15 cortex TGGGGTTTCC 4.9 0.0049 P1 cortex TGGGGTTTCC 18.2 0.0182 P1 cortex AACTGACATT (2) 4.5 0.0045 Hypothalamus TGGGGTTTCC 23.5 0.0235 Hypothalamus CTGCTCACCC 5.4 0.0054 Hypothalamus GTGCCTGGGC (2) 3.6 0.0036 Hypothalamus TGTCATTGTG 3.6 0.0036 Hypothalamus TTGGTGCTGG (3) 1.8 0.0018 E12.5 retina CTGCTCACCC 3.8 0.0038 E12.5 retina TGGGGTTTCC 3.8 0.0038 E14.5 retina TGGGGTTTCC 7.3 0.0073 E14.5 retina CCTTCCAGGA (2) 1.8 0.0018 E14.5 retina TTGGTGCTGG (3) 1.8 0.0018 E16.5 retina TGGGGTTTCC 5.4 0.0054 E16.5 retina CAAGCTCCAC 1.8 0.0018 E16.5 retina CCTTCCAGGA (2) 1.8 0.0018 E16.5 retina CTGCTCACCC 1.8 0.0018 E16.5 retina GCTCACCTCG 1.8 0.0018 E16.5 retina TTGGTGCTGG (3) 1.8 0.0018 E18.5 retina TGGGGTTTCC 5.5 0.0055 E18.5 retina GTGCCTGGGC (2) 3.6 0.0036 P0.5 retina TGGGGTTTCC 13.7 0.0137 P0.5 retina GTGCCTGGGC (2) 3.9 0.0039 P0.5 retina CTGCTCACCC 2 0.002 P2.5 retina TGGGGTTTCC 37 0.037 P2.5 retina CTGCTCACCC 5.3 0.0053 P2.5 retina AACTGACATT (2) 1.8 0.0018 P2.5 retina GTGCCTGGGC (2) 1.8 0.0018 P2.5 retina TTGGTGCTGG (3) 1.8 0.0018 P4.5 retina TGGGGTTTCC 31.7 0.0317 P4.5 retina GTGCCTGGGC (2) 4 0.004 P4.5 retina CTGCTCACCC 2 0.002 P4.5 retina TTGGTGCTGG (3) 2 0.002 P6.5 retina TGGGGTTTCC 31.7 0.0317 P6.5 retina GTGCCTGGGC (2) 1.7 0.0017 P6.5 retina TTGGTGCTGG (3) 1.7 0.0017 P10.5 crx- retina TGGGGTTTCC 27.9 0.0279 P10.5 crx- retina CTGCTCACCC 1.9 0.0019 P10.5 crx- retina GCTCACCTCG 1.9 0.0019 P10.5 crx- retina GTGCCTGGGC (2) 1.9 0.0019 P10.5 crx+ retina TGGGGTTTCC 38.4 0.0384 P10.5 crx+ retina AACTGACATT (2) 1.9 0.0019 P10.5 crx+ retina CCTTCCAGGA (2) 1.9 0.0019 P10.5 crx+ retina CTGCTCACCC 1.9 0.0019 P10.5 crx+ retina GTGCCTGGGC (2) 1.9 0.0019 P10.5 crx+ retina TGTCATTGTG 1.9 0.0019 Adult retinal TGGGGTTTCC 77.8 0.0778 Adult retinal CTGCTCACCC 13 0.013 Adult retinal GTGCCTGGGC (2) 3.7 0.0037 Adult retinal CCTTCCAGGA (2) 1.9 0.0019 Adult retinal GCTCACCTCG 1.9 0.0019 ONL TGGGGTTTCC 44.1 0.0441 ONL CTGCTCACCC 15.3 0.0153 ONL TGTCATTGTG 5.7 0.0057 ONL GTGCCTGGGC (2) 3.8 0.0038 ONL TTGGTGCTGG (3) 3.8 0.0038