Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.278878	Slc30a5	solute carrier family 30 (zinc transporter), member 5	13		69048
Gene Ontology	apical plasma membrane | cation transport | cation transporter activity | cobalt ion transport | extracellular space | Golgi apparatus | integral to membrane | membrane | membrane fraction | secretory granule | zinc ion transport | zinc ion transporter activity
Human Homolog	SLC30A5[solute carrier family 30 (zinc transporter), member 5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 100 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CGGGGCAGGC (3) 1.6 0.0016 P8 Cb GC TAGCCCAGGC (30) 1.6 0.0016 P8 Cb GC TTTATTACAA 1.6 0.0016 Cb medulloblastoma GCTCTATACA (3) 6.9 0.0069 Cb medulloblastoma GCTGGAACTG (6) 4.6 0.0046 Cb medulloblastoma TAGCCCAGGC (30) 4.6 0.0046 Cb medulloblastoma TTTATTACAA 4.6 0.0046 P8 GC+1d culture GAGGAGAAGT (2) 2.3 0.0023 P8 GC+1d culture GCTGGAACTG (6) 2.3 0.0023 P8 GC+1d culture CGGGGCAGGC (3) 1.1 0.0011 P8 GC+1d culture GCTCTATACA (3) 1.1 0.0011 P8 GC+1d culture TAGCCCAGGC (30) 1.1 0.0011 P8 GC+SHH+1d culture TAGCCCAGGC (30) 8.2 0.0082 P8 GC+SHH+1d culture GCTCTATACA (3) 5.9 0.0059 P8 GC+SHH+1d culture GCTGGAACTG (6) 5.9 0.0059 3T3 fibroblasts TAGCCCAGGC (30) 14 0.014 3T3 fibroblasts GGTGATTGTT 3.5 0.0035 E15 cortex TAGCCCAGGC (30) 24.7 0.0247 E15 cortex CAGTTGCTGG (10) 4.9 0.0049 E15 cortex CGGGGCAGGC (3) 4.9 0.0049 E15 cortex GCTGGAACTG (6) 4.9 0.0049 E15 cortex TGGTTGCTTG 4.9 0.0049 E15 cortex TTTATTACAA 4.9 0.0049 P1 cortex GCTGGAACTG (6) 9.1 0.0091 P1 cortex TGGTTGCTTG 9.1 0.0091 Hypothalamus TAGCCCAGGC (30) 7.2 0.0072 Hypothalamus GCTCTATACA (3) 5.4 0.0054 Hypothalamus CAGTTGCTGG (10) 1.8 0.0018 Hypothalamus GCTGGAACTG (6) 1.8 0.0018 E12.5 retina GCTGGAACTG (6) 16.9 0.0169 E12.5 retina TAGCCCAGGC (30) 7.5 0.0075 E12.5 retina GCTCTATACA (3) 5.6 0.0056 E12.5 retina TTCATTCCAA (2) 3.8 0.0038 E12.5 retina AAGCAAAGGG (2) 1.9 0.0019 E12.5 retina TGGTTGCTTG 1.9 0.0019 E12.5 retina TTTATTACAA 1.9 0.0019 E14.5 retina TAGCCCAGGC (30) 12.8 0.0128 E14.5 retina TGGTTGCTTG 10.9 0.0109 E14.5 retina CGGGGCAGGC (3) 5.5 0.0055 E14.5 retina GCTCTATACA (3) 5.5 0.0055 E14.5 retina GCTGGAACTG (6) 5.5 0.0055 E14.5 retina TTCATTCCAA (2) 5.5 0.0055 E14.5 retina GGTGATTGTT 1.8 0.0018 E14.5 retina TTTATTACAA 1.8 0.0018 E16.5 retina TGGTTGCTTG 10.9 0.0109 E16.5 retina GCTGGAACTG (6) 7.2 0.0072 E16.5 retina TAGCCCAGGC (30) 7.2 0.0072 E16.5 retina GCTCTATACA (3) 5.4 0.0054 E16.5 retina TTTATTACAA 3.6 0.0036 E16.5 retina CAGTTGCTGG (10) 1.8 0.0018 E18.5 retina TAGCCCAGGC (30) 7.3 0.0073 E18.5 retina GCTGGAACTG (6) 5.5 0.0055 E18.5 retina AAGCAAAGGG (2) 1.8 0.0018 E18.5 retina GCTCTATACA (3) 1.8 0.0018 E18.5 retina TTTATTACAA 1.8 0.0018 P0.5 retina TAGCCCAGGC (30) 5.9 0.0059 P0.5 retina CGGGGCAGGC (3) 2 0.002 P0.5 retina GCTCTATACA (3) 2 0.002 P0.5 retina GCTGGAACTG (6) 2 0.002 P0.5 retina GGTGATTGTT 2 0.002 P0.5 retina TGGTTGCTTG 2 0.002 P2.5 retina GCTCTATACA (3) 14.1 0.0141 P2.5 retina TAGCCCAGGC (30) 8.8 0.0088 P2.5 retina GCTGGAACTG (6) 3.5 0.0035 P2.5 retina TGGTTGCTTG 3.5 0.0035 P2.5 retina AAGCAAAGGG (2) 1.8 0.0018 P4.5 retina GCTCTATACA (3) 5.9 0.0059 P4.5 retina GCTGGAACTG (6) 4 0.004 P4.5 retina AAGCAAAGGG (2) 2 0.002 P4.5 retina TAGCCCAGGC (30) 2 0.002 P4.5 retina TGGTTGCTTG 2 0.002 P6.5 retina GCTCTATACA (3) 5 0.005 P6.5 retina GCTGGAACTG (6) 5 0.005 P6.5 retina TAGCCCAGGC (30) 5 0.005 P6.5 retina CAGTTGCTGG (10) 1.7 0.0017 P6.5 retina TGGTTGCTTG 1.7 0.0017 P6.5 retina TTCATTCCAA (2) 1.7 0.0017 P6.5 retina TTTATTACAA 1.7 0.0017 P10.5 crx- retina TGGTTGCTTG 5.6 0.0056 P10.5 crx- retina CAGTTGCTGG (10) 1.9 0.0019 P10.5 crx- retina GCTCTATACA (3) 1.9 0.0019 P10.5 crx- retina GCTGGAACTG (6) 1.9 0.0019 P10.5 crx- retina TAGCCCAGGC (30) 1.9 0.0019 P10.5 crx+ retina GCTCTATACA (3) 5.8 0.0058 P10.5 crx+ retina TAGCCCAGGC (30) 3.8 0.0038 P10.5 crx+ retina TGGTTGCTTG 3.8 0.0038 P10.5 crx+ retina GCTGGAACTG (6) 1.9 0.0019 P10.5 crx+ retina TTTATTACAA 1.9 0.0019 Adult retinal GCTGGAACTG (6) 3.7 0.0037 Adult retinal AAGCAAAGGG (2) 1.9 0.0019 Adult retinal CGGGGCAGGC (3) 1.9 0.0019 Adult retinal GAGGAGAAGT (2) 1.9 0.0019 Adult retinal TAGCCCAGGC (30) 1.9 0.0019 Adult retinal TGGTTGCTTG 1.9 0.0019 Adult retinal TTTATTACAA 1.9 0.0019 ONL TTCATTCCAA (2) 11.5 0.0115 ONL TAGCCCAGGC (30) 9.6 0.0096 ONL GCTCTATACA (3) 5.7 0.0057 ONL TGGTTGCTTG 5.7 0.0057 ONL TTTATTACAA 1.9 0.0019