| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AGAACTTCAA CAGCAGACTC (2) TGTCCAGGGC
| 6.5 | 0.0065 |
| Cb medulloblastoma | ACTGGATAGT AGAACTTCAA
| 18.5 | 0.0185 |
| P8 GC+1d culture | ACTGGATAGT AGAACTTCAA CAGCAGACTC (2) TGGAGACAGG TGTCCAGGGC
| 14.8 | 0.0148 |
| P8 GC+SHH+1d culture | ACTGGATAGT AGAACTTCAA CAGCAGACTC (2) TGTCCAGGGC
| 10.5 | 0.0105 |
| 3T3 fibroblasts | TGTCCAGGGC
| 3.5 | 0.0035 |
| E15 cortex | AGAACTTCAA TGGAGACAGG
| 9.8 | 0.0098 |
| P1 cortex | TGTCCAGGGC
| 4.5 | 0.0045 |
| Hypothalamus | ACTGGATAGT AGAACTTCAA GAACTCACTT (2) TGGAGACAGG TGTCCAGGGC
| 21.6 | 0.0216 |
| E12.5 retina | ACTGGATAGT CAGCAGACTC (2) TGTCCAGGGC
| 7.6 | 0.0076 |
| E14.5 retina | ACTGGATAGT
| 3.6 | 0.0036 |
| E18.5 retina | ACTGGATAGT GAACTCACTT (2) TGTCCAGGGC
| 5.4 | 0.0054 |
| P0.5 retina | ACTGGATAGT AGAACTTCAA TGTCCAGGGC
| 7.9 | 0.0079 |
| P2.5 retina | ACTGGATAGT CAGCAGACTC (2) TGTCCAGGGC
| 7.1 | 0.0071 |
| P4.5 retina | ACTGGATAGT AGAACTTCAA
| 7.9 | 0.0079 |
| P6.5 retina | ACTGGATAGT AGAACTTCAA GAACTCACTT (2) TGTCCAGGGC
| 15.1 | 0.0151 |
| P10.5 crx- retina | ACTGGATAGT
| 13 | 0.013 |
| P10.5 crx+ retina | ACTGGATAGT GAACTCACTT (2) TGTCCAGGGC
| 9.6 | 0.0096 |
| Adult retinal | ACTGGATAGT GAACTCACTT (2) TGTCCAGGGC
| 7.5 | 0.0075 |
| ONL | AGAACTTCAA TGTCCAGGGC
| 5.7 | 0.0057 |