Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.27897	Dnaja1	DnaJ (Hsp40) homolog, subfamily A, member 1	4		15502
Gene Ontology	protein folding | response to heat
Human Homolog	DNAJA1[DnaJ (Hsp40) homolog, subfamily A, member 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 61 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTTAAATCTG 19.6 0.0196 P8 Cb GC GGGATATAAA 3.3 0.0033 P8 Cb GC CTAGGTATGT 1.6 0.0016 P8 Cb GC GAGAACGCAT 1.6 0.0016 P8 Cb GC GATATCTTTG 1.6 0.0016 P8 Cb GC TCGGTCTGTC 1.6 0.0016 Cb medulloblastoma CTTAAATCTG 4.6 0.0046 P8 GC+1d culture CTTAAATCTG 13.7 0.0137 P8 GC+1d culture GGGATATAAA 8 0.008 P8 GC+1d culture TCGGTCTGTC 1.1 0.0011 P8 GC+SHH+1d culture CTTAAATCTG 11.7 0.0117 P8 GC+SHH+1d culture GGGATATAAA 8.2 0.0082 P8 GC+SHH+1d culture CTAGGTATGT 3.5 0.0035 3T3 fibroblasts CTTAAATCTG 3.5 0.0035 E15 cortex GAGAACGCAT 4.9 0.0049 E15 cortex GATATCTTTG 4.9 0.0049 P1 cortex GGGATATAAA 18.2 0.0182 P1 cortex CTTAAATCTG 13.6 0.0136 Hypothalamus CTTAAATCTG 10.9 0.0109 Hypothalamus CTAGGTATGT 1.8 0.0018 Hypothalamus TCGGTCTGTC 1.8 0.0018 E12.5 retina CTTAAATCTG 11.3 0.0113 E12.5 retina GGGATATAAA 3.8 0.0038 E12.5 retina CAGCAGTAGA (2) 1.9 0.0019 E12.5 retina CTAGGTATGT 1.9 0.0019 E14.5 retina CTTAAATCTG 12.8 0.0128 E14.5 retina GGGATATAAA 5.5 0.0055 E14.5 retina CTAGGTATGT 1.8 0.0018 E14.5 retina TCGGTCTGTC 1.8 0.0018 E16.5 retina CTTAAATCTG 12.7 0.0127 E16.5 retina GAGAACGCAT 3.6 0.0036 E16.5 retina GGGATATAAA 3.6 0.0036 E16.5 retina CTAGGTATGT 1.8 0.0018 E16.5 retina GAAAATGTAA 1.8 0.0018 E18.5 retina CTTAAATCTG 21.8 0.0218 E18.5 retina CTAGGTATGT 5.5 0.0055 E18.5 retina GGGATATAAA 5.5 0.0055 E18.5 retina CAGCAGTAGA (2) 3.6 0.0036 E18.5 retina TCGGTCTGTC 1.8 0.0018 P0.5 retina CTTAAATCTG 13.7 0.0137 P0.5 retina GATATCTTTG 2 0.002 P2.5 retina CTTAAATCTG 17.6 0.0176 P2.5 retina GGGATATAAA 3.5 0.0035 P2.5 retina CTAGGTATGT 1.8 0.0018 P4.5 retina CTTAAATCTG 11.9 0.0119 P4.5 retina CTAGGTATGT 4 0.004 P4.5 retina GGGATATAAA 4 0.004 P4.5 retina GAAAATGTAA 2 0.002 P6.5 retina CTTAAATCTG 13.3 0.0133 P6.5 retina CTAGGTATGT 3.3 0.0033 P6.5 retina GGGATATAAA 1.7 0.0017 P10.5 crx- retina CTTAAATCTG 14.9 0.0149 P10.5 crx- retina GGGATATAAA 7.4 0.0074 P10.5 crx- retina CTAGGTATGT 5.6 0.0056 P10.5 crx+ retina CTTAAATCTG 11.5 0.0115 P10.5 crx+ retina TCGGTCTGTC 3.8 0.0038 P10.5 crx+ retina GATATCTTTG 1.9 0.0019 Adult retinal CTTAAATCTG 11.1 0.0111 Adult retinal TCGGTCTGTC 1.9 0.0019 ONL CTTAAATCTG 1.9 0.0019 ONL GAAAATGTAA 1.9 0.0019