Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.279256	Ndrg3	N-myc downstream regulated gene 3	2		29812
Gene Ontology	catalytic activity | cell differentiation
Human Homolog	NDRG3[NDRG family member 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 91 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTAAAAAAAA (80) 13.1 0.0131 P8 Cb GC CTGGCAGATG (3) 3.3 0.0033 P8 Cb GC CACACACACT (4) 1.6 0.0016 P8 Cb GC CTTTCTTGTA 1.6 0.0016 P8 Cb GC TAATGTCCCT (3) 1.6 0.0016 Cb medulloblastoma TTAAAAAAAA (80) 53.2 0.0532 Cb medulloblastoma ATGGTGTGCT 2.3 0.0023 Cb medulloblastoma GTAGTTCACA (3) 2.3 0.0023 Cb medulloblastoma TGTGTGCAAG (8) 2.3 0.0023 Cb medulloblastoma TGTGTGCGAG (8) 2.3 0.0023 P8 GC+1d culture TTAAAAAAAA (80) 28.5 0.0285 P8 GC+1d culture AATTTTTTTT (12) 2.3 0.0023 P8 GC+1d culture TAATGTCCCT (3) 2.3 0.0023 P8 GC+1d culture TGTGTGCAAG (8) 2.3 0.0023 P8 GC+1d culture TGTGTGCGAG (8) 1.1 0.0011 P8 GC+SHH+1d culture TTAAAAAAAA (80) 34 0.034 P8 GC+SHH+1d culture TAATGTCCCT (3) 2.3 0.0023 P8 GC+SHH+1d culture TGTGTGCAAG (8) 2.3 0.0023 P8 GC+SHH+1d culture AATTTTTTTT (12) 1.2 0.0012 P8 GC+SHH+1d culture GTAGTTCACA (3) 1.2 0.0012 3T3 fibroblasts CCAAGGCACA (4) 3.5 0.0035 E15 cortex AATTTTTTTT (12) 4.9 0.0049 E15 cortex CCAAGGCACA (4) 4.9 0.0049 E15 cortex TTAAAAAAAA (80) 4.9 0.0049 P1 cortex TTAAAAAAAA (80) 13.6 0.0136 P1 cortex TAATGTCCCT (3) 4.5 0.0045 Hypothalamus TTAAAAAAAA (80) 19.9 0.0199 Hypothalamus TAATGTCCCT (3) 3.6 0.0036 Hypothalamus ATGGTGTGCT 1.8 0.0018 Hypothalamus CTTTCTTGTA 1.8 0.0018 Hypothalamus TGTGTGCAAG (8) 1.8 0.0018 Hypothalamus TGTGTGCGAG (8) 1.8 0.0018 E12.5 retina TTAAAAAAAA (80) 11.3 0.0113 E12.5 retina GTAGTTCACA (3) 5.6 0.0056 E12.5 retina CCAAGGCACA (4) 1.9 0.0019 E12.5 retina TAATGTCCCT (3) 1.9 0.0019 E12.5 retina TGTGTGCAAG (8) 1.9 0.0019 E14.5 retina TTAAAAAAAA (80) 16.4 0.0164 E14.5 retina GTAGTTCACA (3) 3.6 0.0036 E14.5 retina CACACACACT (4) 1.8 0.0018 E14.5 retina CTTTCCTGTA (3) 1.8 0.0018 E14.5 retina TAATGTCCCT (3) 1.8 0.0018 E16.5 retina TTAAAAAAAA (80) 16.3 0.0163 E16.5 retina CTGGCAGATG (3) 1.8 0.0018 E16.5 retina CTTTCCTGTA (3) 1.8 0.0018 E16.5 retina GTAGTTCACA (3) 1.8 0.0018 E18.5 retina TTAAAAAAAA (80) 50.9 0.0509 E18.5 retina CTGGCAGATG (3) 1.8 0.0018 P0.5 retina TTAAAAAAAA (80) 17.7 0.0177 P0.5 retina TGTGTGCAAG (8) 3.9 0.0039 P0.5 retina CACACACACT (4) 2 0.002 P0.5 retina CCAAGGCACA (4) 2 0.002 P0.5 retina GTAGTTCACA (3) 2 0.002 P2.5 retina TTAAAAAAAA (80) 40.5 0.0405 P2.5 retina TGTGTGCAAG (8) 7 0.007 P2.5 retina GTAGTTCACA (3) 5.3 0.0053 P2.5 retina CACACACACT (4) 1.8 0.0018 P2.5 retina CCAAGGCACA (4) 1.8 0.0018 P2.5 retina CTGGCAGATG (3) 1.8 0.0018 P2.5 retina TAATGTCCCT (3) 1.8 0.0018 P4.5 retina TTAAAAAAAA (80) 47.6 0.0476 P4.5 retina GTAGTTCACA (3) 2 0.002 P4.5 retina TAATGTCCCT (3) 2 0.002 P6.5 retina TTAAAAAAAA (80) 16.7 0.0167 P6.5 retina GTAGTTCACA (3) 3.3 0.0033 P6.5 retina ATGGTGTGCT 1.7 0.0017 P6.5 retina CCAAGGCACA (4) 1.7 0.0017 P6.5 retina TGTGTGCAAG (8) 1.7 0.0017 P6.5 retina TGTGTGCGAG (8) 1.7 0.0017 P10.5 crx- retina TTAAAAAAAA (80) 13 0.013 P10.5 crx- retina ATGGTGTGCT 7.4 0.0074 P10.5 crx- retina TAATGTCCCT (3) 3.7 0.0037 P10.5 crx- retina CTTTCTTGTA 1.9 0.0019 P10.5 crx- retina TGTGTGCGAG (8) 1.9 0.0019 P10.5 crx+ retina TAATGTCCCT (3) 5.8 0.0058 P10.5 crx+ retina TTAAAAAAAA (80) 5.8 0.0058 P10.5 crx+ retina TGTGTGCAAG (8) 1.9 0.0019 Adult retinal TAATGTCCCT (3) 11.1 0.0111 Adult retinal TTAAAAAAAA (80) 7.4 0.0074 Adult retinal CACACACACT (4) 1.9 0.0019 Adult retinal CTGGCAGATG (3) 1.9 0.0019 Adult retinal CTTTCCTGTA (3) 1.9 0.0019 Adult retinal CTTTCTTGTA 1.9 0.0019 Adult retinal GTAGTTCACA (3) 1.9 0.0019 Adult retinal TGTGTGCGAG (8) 1.9 0.0019 ONL TTAAAAAAAA (80) 7.7 0.0077 ONL TAATGTCCCT (3) 5.7 0.0057 ONL ATGGTGTGCT 3.8 0.0038 ONL TGTGTGCAAG (8) 3.8 0.0038 ONL CTGGCAGATG (3) 1.9 0.0019 ONL GTAGTTCACA (3) 1.9 0.0019