Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.279361	Vcl	vinculin	14	14 2.5 cM	22330
Gene Ontology	actin binding | adherens junction | cell adhesion | costamere | cytoskeleton | focal adhesion | intercellular junction | lamellipodium biogenesis | metabolism | oxidoreductase activity | protein binding | regulation of cell migration | structural molecule activity
Human Homolog	VCL[vinculin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 23 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCTCTGCTGA (2) TTTGTTTGTT (2) 44 0.044 Cb medulloblastoma TCCACCAGAT (2) TTTGTTTGTT (2) 4.6 0.0046 P8 GC+1d culture TTTGTTTGTT (2) 9.1 0.0091 P8 GC+SHH+1d culture TTTGTTTGTT (2) 10.5 0.0105 E15 cortex TCCACCAGAT (2) 4.9 0.0049 Hypothalamus GCTCTGCTGA (2) TTTGTTTGTT (2) 5.4 0.0054 E12.5 retina TTTGTTTGTT (2) 3.8 0.0038 E14.5 retina TTTGTTTGTT (2) 1.8 0.0018 E16.5 retina TTTGTTTGTT (2) 7.2 0.0072 E18.5 retina TTTGTTTGTT (2) 5.5 0.0055 P0.5 retina TCCACCAGAT (2) 2 0.002 P2.5 retina TCCACCAGAT (2) TTTGTTTGTT (2) 8.8 0.0088 P4.5 retina TTTGTTTGTT (2) 4 0.004 P6.5 retina TTTGTTTGTT (2) 6.7 0.0067 P10.5 crx- retina TTTGTTTGTT (2) 5.6 0.0056 P10.5 crx+ retina TTTGTTTGTT (2) 1.9 0.0019 Adult retinal TCCACCAGAT (2) TTTGTTTGTT (2) 9.3 0.0093 ONL TTTGTTTGTT (2) 9.6 0.0096