Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.279427
Zcchc8
zinc finger, CCHC domain containing 8
5
70650
Gene Ontology
nucleic acid binding
Human Homolog
ZCCHC8[zinc finger, CCHC domain containing 8]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 60 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
GTTGTAGAAA (
4
)
4.9
0.0049
P8 Cb GC
ATTTTAATAA
3.3
0.0033
P8 Cb GC
GATGAGGATG (
8
)
3.3
0.0033
P8 Cb GC
CTGAAGAAGT (
8
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
ATTTTAATAA
2.3
0.0023
Cb medulloblastoma
CTGAAGAAGT (
8
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
ATTTTAATAA
1.1
0.0011
P8 GC+1d culture
GCTGAATCCA
1.1
0.0011
P8 GC+1d culture
GTTGTAGAAA (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
GTTGTAGAAA (
4
)
3.5
0.0035
P8 GC+SHH+1d culture
ATTTTAATAA
2.3
0.0023
P8 GC+SHH+1d culture
ATTTTAAAAA
(
7
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
GATGAGGATG (
8
)
3.5
0.0035
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
GATGAGGATG (
8
)
9.9
0.0099
E15 cortex
ATTTTAATAA
4.9
0.0049
E15 cortex
GTTGTAGAAA (
4
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
CTGAAGAAGT (
8
)
9.1
0.0091
P1 cortex
ATTTTAATAA
4.5
0.0045
P1 cortex
GTTGTAGAAA (
4
)
4.5
0.0045
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
CTGAAGAAGT (
8
)
1.8
0.0018
Hypothalamus
GATGAGGATG (
8
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
GTTGTAGAAA (
4
)
9.4
0.0094
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
ATTTTAATAA
5.5
0.0055
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
GTTGTAGAAA (
4
)
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
ATTTTAAAAA
(
7
)
1.8
0.0018
E18.5 retina
GTTGTAGAAA (
4
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
GCTGAATCCA
3.9
0.0039
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
GTTGTAGAAA (
4
)
8.8
0.0088
P2.5 retina
GATGAGGATG (
8
)
3.5
0.0035
P2.5 retina
ATTTTAATAA
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
GTTGTAGAAA (
4
)
4
0.004
P4.5 retina
ATTTTAATAA
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
ATTTTAATAA
1.7
0.0017
P6.5 retina
CTGAAGAAGT (
8
)
1.7
0.0017
P6.5 retina
GATGAGGATG (
8
)
1.7
0.0017
P6.5 retina
GTTGTAGAAA (
4
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
ATTTTAATAA
1.9
0.0019
P10.5 crx- retina
GCTGAATCCA
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
GTTGTAGAAA (
4
)
5.8
0.0058
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
GCTGAATCCA
3.8
0.0038
