Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.279603	Synj2bp	synaptojanin 2 binding protein	12	12	24071
Gene Ontology	cytoplasm organization and biogenesis | integral to membrane | intracellular signaling cascade | mitochondrial outer membrane | mitochondrion | outer membrane | protein binding | protein targeting | receptor activity | regulation of endocytosis | Rho protein signal transduction
Human Homolog	SYNJ2BP[synaptojanin 2 binding protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 82 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC GGCCTGCTTA (2) 3.3 0.0033 Cb medulloblastoma GGCCTGCTTA (2) 2.3 0.0023 Cb medulloblastoma TCTCAAGGTG 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture CTTCTCTTGT (5) 5.7 0.0057 P8 GC+1d culture TCTCAAGGTG 2.3 0.0023 P8 GC+1d culture CATAAAAAAA (13) 1.1 0.0011 P8 GC+1d culture GACGACACCT 1.1 0.0011 P8 GC+1d culture GTAGCAGTTT (2) 1.1 0.0011 P8 GC+1d culture GTTAGCAGTT (3) 1.1 0.0011 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture CTTCTCTTGT (5) 2.3 0.0023 P8 GC+SHH+1d culture CTCTGCTAAT 1.2 0.0012 P8 GC+SHH+1d culture GGCCTGCTTA (2) 1.2 0.0012 P8 GC+SHH+1d culture GTAGCAGTTT (2) 1.2 0.0012 P8 GC+SHH+1d culture TCTCAAGGTG 1.2 0.0012 3T3 fibroblasts GGAGAGCTGT (5) 14 0.014 3T3 fibroblasts TCTCAAGGTG 7 0.007 3T3 fibroblasts CTCTGCTAAT 3.5 0.0035 3T3 fibroblasts CTGTGATGGC (4) 3.5 0.0035 3T3 fibroblasts GACGACACCT 3.5 0.0035 3T3 fibroblasts GGCCTGCTTA (2) 3.5 0.0035 E15 cortex GCCAAGATCT (5) 4.9 0.0049 E15 cortex GGAGAGCTGT (5) 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex GCCAAGATCT (5) 4.5 0.0045 P1 cortex TCTCAAGGTG 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus CATAAAAAAA (13) 3.6 0.0036 Hypothalamus CTGTGATGGC (4) 3.6 0.0036 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina CTGTGATGGC (4) 3.8 0.0038 E12.5 retina GACGACACCT 1.9 0.0019 E12.5 retina GGCCTGCTTA (2) 1.9 0.0019 E12.5 retina GTAGCAGTTT (2) 1.9 0.0019 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina CTCTGCTAAT 3.6 0.0036 E14.5 retina GCCAAGATCT (5) 1.8 0.0018 E14.5 retina GGCCTGCTTA (2) 1.8 0.0018 E14.5 retina GGTTTTCTTT (5) 1.8 0.0018 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina GTTAGCAGTT (3) 3.6 0.0036 E16.5 retina GCCAAGATCT (5) 1.8 0.0018 E16.5 retina GGAGAGCTGT (5) 1.8 0.0018 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina GGTTTTCTTT (5) 3.6 0.0036 E18.5 retina CATAAAAAAA (13) 1.8 0.0018 E18.5 retina CTTCTCTTGT (5) 1.8 0.0018 E18.5 retina GGAGAGCTGT (5) 1.8 0.0018 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina CTTCTCTTGT (5) 7.9 0.0079 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina GCCAAGATCT (5) 1.8 0.0018 P2.5 retina GGCCTGCTTA (2) 1.8 0.0018 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina CTGTGATGGC (4) 5.9 0.0059 P4.5 retina CTTCTCTTGT (5) 4 0.004 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina CTTCTCTTGT (5) 5 0.005 P6.5 retina CATAAAAAAA (13) 1.7 0.0017 P6.5 retina CTGTGATGGC (4) 1.7 0.0017 P6.5 retina GTTAGCAGTT (3) 1.7 0.0017 P10.5 crx- retina CTTCTCTTGT (5) 9.3 0.0093 P10.5 crx- retina GTTAGCAGTT (3) 1.9 0.0019 P10.5 crx- retina TCTCAAGGTG 1.9 0.0019 P10.5 crx+ retina CTGTGATGGC (4) 3.8 0.0038 P10.5 crx+ retina GGCCTGCTTA (2) 3.8 0.0038 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina CTTCTCTTGT (5) 1.9 0.0019 P10.5 crx+ retina GCCAAGATCT (5) 1.9 0.0019 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal CTCTGCTAAT 1.9 0.0019 Adult retinal CTTCTCTTGT (5) 1.9 0.0019 Adult retinal GACGACACCT 1.9 0.0019 Adult retinal GGCCTGCTTA (2) 1.9 0.0019 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL CTGTGATGGC (4) 1.9 0.0019 ONL GGTTTTCTTT (5) 1.9 0.0019 ONL GTAGCAGTTT (2) 1.9 0.0019