Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.279690	Ptn	pleiotrophin	6	6 13.5 cM	19242
Gene Ontology	bone mineralization | cell proliferation | extracellular matrix | extracellular space | growth factor activity | heparin binding | learning | ossification | regulation of cell cycle
Human Homolog	PTN[pleiotrophin (heparin binding growth factor 8, neurite growth-promoting factor 1)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 111 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAATCCTTTC (2) AAGACTCAGA (2) AGAAAGAAAA ATAGGCAAAA GCGGCTAGTT TAAAAAAAAA (3) TAAACTACTT TTCCAATCTT TTTCAATCTT 153.3 0.1533 Cb medulloblastoma AAATCCTTTC (2) AGAAAGAAAA TAAAAAAAAA (3) TTTCAATCTT 131.7 0.1317 P8 GC+1d culture AAAACTCACA AAATCCTTTC (2) ATAGGCAAAA TAAAAAAAAA (3) TAAACTACTT TTTCAATCTT 196.3 0.1963 P8 GC+SHH+1d culture AAAACTCACA AAATCCTTTC (2) AGAAAGAAAA ATAGGCAAAA GCGGCTAGTT TAAAAAAAAA (3) TAAACTACTT TTTCAATCTT 175.8 0.1758 3T3 fibroblasts AAATCCTTTC (2) AAGACTCAGA (2) ATAGGCAAAA TAAAAAAAAA (3) TAAACTACTT TTTCAATCTT 84 0.084 E15 cortex AAATCCTTTC (2) AAGACTCAGA (2) TAAAAAAAAA (3) 49.5 0.0495 P1 cortex AAATCCTTTC (2) AGAAAGAAAA ATAGGCAAAA TAAAAAAAAA (3) TAAACTACTT 140.9 0.1409 Hypothalamus AAATCCTTTC (2) AGAAAGAAAA ATAGGCAAAA TAAAAAAAAA (3) TAAACTACTT TTCCAATCTT TTTCAATCTT 70.6 0.0706 E12.5 retina AAATCCTTTC (2) AAGACTCACA (2) AGAAAGAAAA ATAGGCAAAA TAAAAAAAAA (3) TTTCAATCTT 48.9 0.0489 E14.5 retina AAATCCTTTC (2) AAGACTCACA (2) TAAAAAAAAA (3) TAAACTACTT TTTCAATCTT 65.5 0.0655 E16.5 retina AAATCCTTTC (2) TAAAAAAAAA (3) TAAACTACTT TTTCAATCTT 32.5 0.0325 E18.5 retina AAATCCTTTC (2) AGAAAGAAAA ATAGGCAAAA TAAAAAAAAA (3) TAAACTACTT TTCCAATCTT TTTCAATCTT 140.1 0.1401 P0.5 retina AAATCCTTTC (2) AAGACTCACA (2) AGAAAGAAAA TAAAAAAAAA (3) TAAACTACTT TTTCAATCTT 57 0.057 P2.5 retina AAATCCTTTC (2) AGAAAGAAAA ATAGGCAAAA TAAAAAAAAA (3) TAAACTACTT TTTCAATCTT 96.9 0.0969 P4.5 retina AAATCCTTTC (2) AAGACTCACA (2) AGAAAGAAAA ATAGGCAAAA TAAAAAAAAA (3) TAAACTACTT TTCCAATCTT TTTCAATCTT 156.3 0.1563 P6.5 retina AAATCCTTTC (2) AGAAAGAAAA ATAGGCAAAA TAAAAAAAAA (3) TAAACTACTT 85.1 0.0851 P10.5 crx- retina AAATCCTTTC (2) AAGACTCAGA (2) TAAAAAAAAA (3) TTCCAATCTT 20.5 0.0205 P10.5 crx+ retina AAATCCTTTC (2) AAGACTCACA (2) ATAGGCAAAA TAAAAAAAAA (3) TAAACTACTT TTTCAATCTT 42.2 0.0422 Adult retinal AAGACTCACA (2) TAAAAAAAAA (3) 20.4 0.0204 ONL AAGACTCACA (2) TAAAAAAAAA (3) TAAACTACTT TTCCAATCTT 36.3 0.0363