Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.279736 A430105D02RikRIKEN cDNA A430105D02 gene 1    77188 
 Mm.279736 Sf3b1splicing factor 3b, subunit 1 1  1 28.9 cM  81898 
 Gene Ontology mRNA processing | nuclear mRNA splicing, via spliceosome | nucleus | pre-mRNA splicing factor activity | spliceosome complex
 Human Homolog SF3B1[splicing factor 3b, subunit 1, 155kDa]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCCAAACTGAAG (3)4.90.0049
P8 Cb GCATTTTTAAAT (2)3.30.0033
P8 Cb GCCAGAATGTTG (4)1.60.0016
P8 Cb GCTTCTTAAGGG (2)1.60.0016
Cb medulloblastomaCAAACTGAAG (3)2.30.0023
Cb medulloblastomaCAGGACGCAC (2)2.30.0023
P8 GC+1d cultureATTTTTAAAT (2)3.40.0034
P8 GC+1d cultureCAAACTGAAG (3)1.10.0011
P8 GC+1d cultureCAGAATGTTG (4)1.10.0011
P8 GC+1d cultureTAACGGAAGG (2)1.10.0011
P8 GC+SHH+1d cultureATTTTTAAAT (2)2.30.0023
P8 GC+SHH+1d cultureCAAACTGAAG (3)1.20.0012
P8 GC+SHH+1d cultureTTCTTAAGGG (2)1.20.0012
3T3 fibroblastsCAAACTGAAG (3)70.007
E15 cortexCAAACTGAAG (3)19.80.0198
E15 cortexTGGAAACCAG (2)4.90.0049
P1 cortexCAAACTGAAG (3)13.60.0136
P1 cortexTTCTTAAGGG (2)4.50.0045
HypothalamusATTTTTAAAT (2)3.60.0036
HypothalamusTTCTTAAGGG (2)1.80.0018
E12.5 retinaCAAACTGAAG (3)3.80.0038
E12.5 retinaTTCTTAAGGG (2)1.90.0019
E14.5 retinaATTTTTAAAT (2)3.60.0036
E14.5 retinaCAAACTGAAG (3)3.60.0036
E16.5 retinaCAAACTGAAG (3)3.60.0036
E16.5 retinaTTCTTAAGGG (2)1.80.0018
E18.5 retinaCAAACTGAAG (3)1.80.0018
E18.5 retinaTTCTTAAGGG (2)1.80.0018
P0.5 retinaCAGGACGCAC (2)20.002
P2.5 retinaCAAACTGAAG (3)1.80.0018
P2.5 retinaCAGGACGCAC (2)1.80.0018
P2.5 retinaTAACGGAAGG (2)1.80.0018
P2.5 retinaTTCTTAAGGG (2)1.80.0018
P4.5 retinaCAAACTGAAG (3)40.004
P4.5 retinaCAGAATGTTG (4)40.004
P4.5 retinaTTCTTAAGGG (2)40.004
P4.5 retinaTGGAAACCAG (2)20.002
P6.5 retinaCAAACTGAAG (3)50.005
P6.5 retinaCAGAATGTTG (4)1.70.0017
P6.5 retinaCAGGACGCAC (2)1.70.0017
P6.5 retinaTTCTTAAGGG (2)1.70.0017
P10.5 crx- retinaATTTTTAAAT (2)3.70.0037
P10.5 crx- retinaCAGAATGTTG (4)1.90.0019
P10.5 crx- retinaCAGGACGCAC (2)1.90.0019
P10.5 crx- retinaTAACGGAAGG (2)1.90.0019
P10.5 crx+ retinaCAGAATGTTG (4)1.90.0019
P10.5 crx+ retinaTGGAAACCAG (2)1.90.0019
Adult retinalATTTTTAAAT (2)3.70.0037