Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.279998	Hmgb2	high mobility group box 2	8	8 B2 (8 31.0 cM)	97165
Gene Ontology	chromatin | chromosome | DNA binding | DNA packaging | nucleus | regulation of transcription, DNA-dependent
Human Homolog	HMGB2[high-mobility group box 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 55 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCTGCAAAGG (2) 24.5 0.0245 P8 Cb GC CCCAGCTTTC (3) 14.7 0.0147 P8 Cb GC GCTGCCCCCC 1.6 0.0016 Cb medulloblastoma GCTGCCCCCC 4.6 0.0046 Cb medulloblastoma CCCAGCTTTC (3) 2.3 0.0023 P8 GC+1d culture TCTGCAAAGG (2) 20.5 0.0205 P8 GC+1d culture CCCAGCTTTC (3) 9.1 0.0091 P8 GC+1d culture GCTGCCCCCC 2.3 0.0023 P8 GC+SHH+1d culture TCTGCAAAGG (2) 32.8 0.0328 P8 GC+SHH+1d culture CCCAGCTTTC (3) 14.1 0.0141 P8 GC+SHH+1d culture GCTGCCCCCC 7 0.007 P8 GC+SHH+1d culture GAGGGCGGCC 1.2 0.0012 3T3 fibroblasts CCCAGCTTTC (3) 14 0.014 3T3 fibroblasts TCTGCAAAGG (2) 10.5 0.0105 3T3 fibroblasts GCTGCCCCCC 7 0.007 E15 cortex TCTGCAAAGG (2) 14.8 0.0148 E15 cortex CCCAGCTTTC (3) 9.9 0.0099 E15 cortex GCTGCCCCCC 9.9 0.0099 P1 cortex TCTGCAAAGG (2) 9.1 0.0091 P1 cortex CCCAGCTTTC (3) 4.5 0.0045 Hypothalamus GCTGCCCCCC 10.9 0.0109 Hypothalamus CCCAGCTTTC (3) 3.6 0.0036 E12.5 retina TCTGCAAAGG (2) 22.5 0.0225 E12.5 retina CCCAGCTTTC (3) 7.5 0.0075 E12.5 retina GCTGCCCCCC 5.6 0.0056 E12.5 retina GAGGGCGGCC 1.9 0.0019 E14.5 retina CCCAGCTTTC (3) 3.6 0.0036 E14.5 retina TCTGCAAAGG (2) 1.8 0.0018 E16.5 retina TCTGCAAAGG (2) 7.2 0.0072 E16.5 retina CCCAGCTTTC (3) 3.6 0.0036 E16.5 retina GCTGCCCCCC 1.8 0.0018 E18.5 retina TCTGCAAAGG (2) 14.6 0.0146 E18.5 retina CCCAGCTTTC (3) 7.3 0.0073 E18.5 retina GCTGCCCCCC 3.6 0.0036 P0.5 retina TCTGCAAAGG (2) 80.5 0.0805 P0.5 retina CCCAGCTTTC (3) 9.8 0.0098 P0.5 retina GCTGCCCCCC 7.9 0.0079 P0.5 retina GAGGGCGGCC 2 0.002 P2.5 retina TCTGCAAAGG (2) 10.6 0.0106 P2.5 retina CCCAGCTTTC (3) 1.8 0.0018 P2.5 retina GCTGCCCCCC 1.8 0.0018 P4.5 retina TCTGCAAAGG (2) 11.9 0.0119 P4.5 retina CCCAGCTTTC (3) 5.9 0.0059 P4.5 retina GCTGCCCCCC 4 0.004 P6.5 retina CCCAGCTTTC (3) 6.7 0.0067 P6.5 retina GCTGCCCCCC 3.3 0.0033 P10.5 crx- retina CCCAGCTTTC (3) 20.4 0.0204 P10.5 crx+ retina CCCAGCTTTC (3) 15.4 0.0154 P10.5 crx+ retina GCTGCCCCCC 3.8 0.0038 Adult retinal TCTGCAAAGG (2) 14.8 0.0148 Adult retinal CCCAGCTTTC (3) 11.1 0.0111 Adult retinal GCTGCCCCCC 3.7 0.0037 ONL CCCAGCTTTC (3) 9.6 0.0096 ONL GCTGCCCCCC 7.7 0.0077 ONL TCTGCAAAGG (2) 3.8 0.0038