Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.280103	Atp1a1	ATPase, Na+/K+ transporting, alpha 1 polypeptide	3	3 48.4 cM	11928
Gene Ontology	ATP binding | ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | catalytic activity | cation transport | cation-transporting ATPase activity | hydrolase activity | hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | integral to membrane | magnesium ion binding | membrane | metabolism | monovalent inorganic cation transport | monovalent inorganic cation transporter activity | plasma membrane | potassium ion transport | sodium ion transport | sodium/potassium-exchanging ATPase activity
Human Homolog	ATP1A1[ATPase, Na+/K+ transporting, alpha 1 polypeptide]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAGCTGTAAC 6.5 0.0065 P8 Cb GC GTGGTTCTGT (2) 3.3 0.0033 P8 Cb GC GCCTATGGAC 1.6 0.0016 Cb medulloblastoma TAGCTGTAAC 39.3 0.0393 Cb medulloblastoma GCCTATGGAC 4.6 0.0046 Cb medulloblastoma GTGGTTCTGT (2) 2.3 0.0023 P8 GC+1d culture TAGCTGTAAC 28.5 0.0285 P8 GC+1d culture CTTTGGTGCT 4.6 0.0046 P8 GC+1d culture GCCTATGGAC 2.3 0.0023 P8 GC+1d culture ACTCTCCAGT 1.1 0.0011 P8 GC+1d culture AGGTGACTTG (2) 1.1 0.0011 P8 GC+SHH+1d culture TAGCTGTAAC 24.6 0.0246 P8 GC+SHH+1d culture CTTTGGTGCT 2.3 0.0023 3T3 fibroblasts TAGCTGTAAC 7 0.007 E15 cortex ACTCTCCAGT 4.9 0.0049 E15 cortex GCGAGGAAGA (2) 4.9 0.0049 P1 cortex GCGAGGAAGA (2) 4.5 0.0045 Hypothalamus TAGCTGTAAC 9.1 0.0091 Hypothalamus GCGAGGAAGA (2) 7.2 0.0072 Hypothalamus GTGGTTCTGT (2) 1.8 0.0018 E12.5 retina AGGTGACTTG (2) 5.6 0.0056 E12.5 retina TAGCTGTAAC 3.8 0.0038 E12.5 retina ACTCTCCAGT 1.9 0.0019 E14.5 retina GTTACAGGAG (2) 1.8 0.0018 E14.5 retina TAGCTGTAAC 1.8 0.0018 E16.5 retina GTTACAGGAG (2) 3.6 0.0036 E16.5 retina AGGTGACTTG (2) 1.8 0.0018 E18.5 retina GCGACAAAAA 3.6 0.0036 P0.5 retina TAGCTGTAAC 9.8 0.0098 P0.5 retina AGGTGACTTG (2) 2 0.002 P2.5 retina GCGACAAAAA 1.8 0.0018 P2.5 retina TAGCTGTAAC 1.8 0.0018 P4.5 retina TAGCTGTAAC 4 0.004 P6.5 retina TAGCTGTAAC 6.7 0.0067 P10.5 crx- retina TAGCTGTAAC 13 0.013 P10.5 crx- retina AGGTGACTTG (2) 1.9 0.0019 P10.5 crx+ retina TAGCTGTAAC 7.7 0.0077 P10.5 crx+ retina AGGTGACTTG (2) 1.9 0.0019 Adult retinal TAGCTGTAAC 7.4 0.0074 Adult retinal CTTTGGTGCT 1.9 0.0019 ONL TAGCTGTAAC 5.7 0.0057 ONL AGGTGACTTG (2) 1.9 0.0019