Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.280267	C1r	complement component 1, r subcomponent	6		50909
Gene Ontology	calcium ion binding | chymotrypsin activity | complement activation, classical pathway | extracellular space | hydrolase activity | peptidase activity | proteolysis and peptidolysis | serine-type endopeptidase activity | trypsin activity
Human Homolog	C1R[complement component 1, r subcomponent]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 46 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC GAAGGAAAAA (11) 1.6 0.0016 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma GAAGGAAAAA (11) 2.3 0.0023 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture CCAGAGATGG (2) 3.4 0.0034 P8 GC+1d culture GAAGAAAAAA (18) 1.1 0.0011 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture GAAGAAAAAA (18) 1.2 0.0012 P8 GC+SHH+1d culture GAAGGAAAAA (11) 1.2 0.0012 3T3 fibroblasts CCAGAGATGG (2) 10.5 0.0105 3T3 fibroblasts AGTGCAGAGG (7) 3.5 0.0035 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex GAAGGAAAAA (11) 9.9 0.0099 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex CCAGAGATGG (2) 4.5 0.0045 P1 cortex GAAGGAAAAA (11) 4.5 0.0045 Hypothalamus GAAAAAAAAA (204) 67 0.067 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina GAAGGAAAAA (11) 5.6 0.0056 E12.5 retina GAAGAAAAAA (18) 1.9 0.0019 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina GAAGAAAAAA (18) 1.8 0.0018 E14.5 retina GAAGGAAAAA (11) 1.8 0.0018 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina GAAGGAAAAA (11) 1.8 0.0018 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina GAAGGAAAAA (11) 16.4 0.0164 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina GAAGGAAAAA (11) 3.9 0.0039 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina GAAGAAAAAA (18) 1.8 0.0018 P2.5 retina GAAGGAAAAA (11) 1.8 0.0018 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina GAAGGAAAAA (11) 5.9 0.0059 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina AGTGCAGAGG (7) 3.3 0.0033 P6.5 retina GAAGAAAAAA (18) 1.7 0.0017 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina GAAGGAAAAA (11) 1.9 0.0019 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL GAAGGAAAAA (11) 3.8 0.0038 ONL CCAGAGATGG (2) 1.9 0.0019 ONL GAAGAAAAAA (18) 1.9 0.0019