Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.28038
Cdca8
cell division cycle associated 8
4
4 D2.2 (4 57.6 cM)
52276
Human Homolog
CDCA8[cell division cycle associated 8]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 76 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTAAAAAAAA (
28
)
55.5
0.0555
P8 Cb GC
GAAAAAAAAA (
204
)
45.7
0.0457
P8 Cb GC
GTTTTAAGTC
3.3
0.0033
P8 Cb GC
GAGCACAGAC
(
2
)
1.6
0.0016
P8 Cb GC
GTTTTAAAAA (
22
)
1.6
0.0016
Cb medulloblastoma
GAAAAAAAAA (
204
)
173.4
0.1734
Cb medulloblastoma
GTAAAAAAAA (
28
)
129.5
0.1295
Cb medulloblastoma
GAGCACAGAC
(
2
)
6.9
0.0069
Cb medulloblastoma
GTTTTAAAAA (
22
)
4.6
0.0046
P8 GC+1d culture
GTAAAAAAAA (
28
)
74.2
0.0742
P8 GC+1d culture
GAAAAAAAAA (
204
)
41.1
0.0411
P8 GC+1d culture
GAGCACAGAC
(
2
)
1.1
0.0011
P8 GC+1d culture
GTTTTAAAAA (
22
)
1.1
0.0011
P8 GC+SHH+1d culture
GTAAAAAAAA (
28
)
132.3
0.1323
P8 GC+SHH+1d culture
GAAAAAAAAA (
204
)
77.3
0.0773
P8 GC+SHH+1d culture
GTTTTAAAAA (
22
)
8.2
0.0082
P8 GC+SHH+1d culture
GTTTTAAGTC
2.3
0.0023
P8 GC+SHH+1d culture
GAGCACAGAC
(
2
)
1.2
0.0012
3T3 fibroblasts
GTAAAAAAAA (
28
)
7
0.007
3T3 fibroblasts
GAGCACAGAC
(
2
)
3.5
0.0035
E15 cortex
GAAAAAAAAA (
204
)
54.4
0.0544
E15 cortex
GTAAAAAAAA (
28
)
34.6
0.0346
E15 cortex
GTTTTAAAAA (
22
)
4.9
0.0049
P1 cortex
GAAAAAAAAA (
204
)
45.5
0.0455
P1 cortex
GTAAAAAAAA (
28
)
36.4
0.0364
Hypothalamus
GTAAAAAAAA (
28
)
99.6
0.0996
Hypothalamus
GAAAAAAAAA (
204
)
67
0.067
Hypothalamus
GAGCACAGAC
(
2
)
3.6
0.0036
E12.5 retina
GAAAAAAAAA (
204
)
46.9
0.0469
E12.5 retina
GTAAAAAAAA (
28
)
41.3
0.0413
E12.5 retina
GTTTTAAGTC
5.6
0.0056
E12.5 retina
GAGCACAGAC
(
2
)
3.8
0.0038
E12.5 retina
GTTTTAAAAA (
22
)
3.8
0.0038
E14.5 retina
GTAAAAAAAA (
28
)
82
0.082
E14.5 retina
GAAAAAAAAA (
204
)
34.6
0.0346
E14.5 retina
GTTTTAAAAA (
22
)
9.1
0.0091
E14.5 retina
GAGCACAGAC
(
2
)
7.3
0.0073
E14.5 retina
GTTTTAAGTC
5.5
0.0055
E16.5 retina
GTAAAAAAAA (
28
)
68.8
0.0688
E16.5 retina
GAAAAAAAAA (
204
)
23.5
0.0235
E16.5 retina
GTTTTAAAAA (
22
)
7.2
0.0072
E16.5 retina
GTTTTAAGTC
3.6
0.0036
E16.5 retina
GAGCACAGAC
(
2
)
1.8
0.0018
E18.5 retina
GTAAAAAAAA (
28
)
189.2
0.1892
E18.5 retina
GAAAAAAAAA (
204
)
65.5
0.0655
E18.5 retina
GTTTTAAAAA (
22
)
25.5
0.0255
E18.5 retina
GTTTTAAGTC
12.7
0.0127
E18.5 retina
GAGCACAGAC
(
2
)
3.6
0.0036
P0.5 retina
GTAAAAAAAA (
28
)
51
0.051
P0.5 retina
GAAAAAAAAA (
204
)
35.3
0.0353
P2.5 retina
GTAAAAAAAA (
28
)
103.8
0.1038
P2.5 retina
GAAAAAAAAA (
204
)
86.2
0.0862
P2.5 retina
GAGCACAGAC
(
2
)
1.8
0.0018
P2.5 retina
GTTTTAAAAA (
22
)
1.8
0.0018
P2.5 retina
GTTTTAAGTC
1.8
0.0018
P4.5 retina
GTAAAAAAAA (
28
)
142.7
0.1427
P4.5 retina
GAAAAAAAAA (
204
)
51.5
0.0515
P4.5 retina
GTTTTAAAAA (
22
)
5.9
0.0059
P4.5 retina
GTTTTAAGTC
2
0.002
P6.5 retina
GTAAAAAAAA (
28
)
66.7
0.0667
P6.5 retina
GAAAAAAAAA (
204
)
40
0.04
P6.5 retina
GAGCACAGAC
(
2
)
3.3
0.0033
P6.5 retina
GTTTTAAAAA (
22
)
1.7
0.0017
P10.5 crx- retina
GTAAAAAAAA (
28
)
26
0.026
P10.5 crx- retina
GAAAAAAAAA (
204
)
16.7
0.0167
P10.5 crx- retina
GAGCACAGAC
(
2
)
1.9
0.0019
P10.5 crx+ retina
GTAAAAAAAA (
28
)
55.8
0.0558
P10.5 crx+ retina
GAAAAAAAAA (
204
)
42.3
0.0423
P10.5 crx+ retina
GAGCACAGAC
(
2
)
1.9
0.0019
Adult retinal
GTAAAAAAAA (
28
)
22.2
0.0222
Adult retinal
GAAAAAAAAA (
204
)
16.7
0.0167
Adult retinal
GAGCACAGAC
(
2
)
5.6
0.0056
ONL
GAAAAAAAAA (
204
)
24.9
0.0249
ONL
GTAAAAAAAA (
28
)
24.9
0.0249
ONL
GAGCACAGAC
(
2
)
3.8
0.0038
ONL
GTTTTAAAAA (
22
)
3.8
0.0038
