Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.28077
6720456B07Rik
RIKEN cDNA 6720456B07 gene
6
101314
Human Homolog
C3orf10[chromosome 3 open reading frame 10]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 67 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTTCCCTAAT
13.1
0.0131
P8 Cb GC
AGAGCTACTG
(
2
)
1.6
0.0016
P8 Cb GC
GCCTCTACAC
1.6
0.0016
Cb medulloblastoma
CTTCCCTAAT
13.9
0.0139
Cb medulloblastoma
CTTTCCCCTA (
2
)
4.6
0.0046
Cb medulloblastoma
TTCTTGGAAC (
4
)
2.3
0.0023
P8 GC+1d culture
CTTCCCTAAT
16
0.016
P8 GC+1d culture
CCACGTCATA
(
5
)
3.4
0.0034
P8 GC+1d culture
CTTTCCCCTA (
2
)
2.3
0.0023
P8 GC+1d culture
GGAGCTGTAG (
4
)
2.3
0.0023
P8 GC+1d culture
AGAGCTACTG
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
CTTCCCTAAT
16.4
0.0164
P8 GC+SHH+1d culture
CTTTCCCCTA (
2
)
3.5
0.0035
P8 GC+SHH+1d culture
CCACGTCATA
(
5
)
2.3
0.0023
P8 GC+SHH+1d culture
GGAGCTGTAG (
4
)
2.3
0.0023
P8 GC+SHH+1d culture
AGAGCTACTG
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
GGGGAGCAAG
(
3
)
1.2
0.0012
3T3 fibroblasts
CCACGTCATA
(
5
)
3.5
0.0035
3T3 fibroblasts
CTTCCCTAAT
3.5
0.0035
E15 cortex
GGAGCTGTAG (
4
)
4.9
0.0049
Hypothalamus
CTTCCCTAAT
10.9
0.0109
Hypothalamus
GGAGCTGTAG (
4
)
5.4
0.0054
Hypothalamus
AGAGCTACTG
(
2
)
3.6
0.0036
Hypothalamus
CTTTCCCCTA (
2
)
3.6
0.0036
Hypothalamus
GGGGAGCAAG
(
3
)
3.6
0.0036
Hypothalamus
CCACGTCATA
(
5
)
1.8
0.0018
E12.5 retina
CTTCCCTAAT
18.8
0.0188
E12.5 retina
AGAGCTACTG
(
2
)
3.8
0.0038
E12.5 retina
CCACGTCATA
(
5
)
3.8
0.0038
E12.5 retina
CTTTCCCCTA (
2
)
1.9
0.0019
E12.5 retina
TTCTTGGAAC (
4
)
1.9
0.0019
E14.5 retina
CTTCCCTAAT
14.6
0.0146
E14.5 retina
GGAGCTGTAG (
4
)
7.3
0.0073
E14.5 retina
AGAGCTACTG
(
2
)
1.8
0.0018
E16.5 retina
CTTCCCTAAT
14.5
0.0145
E16.5 retina
CTTTCCCCTA (
2
)
1.8
0.0018
E16.5 retina
GCCTCTACAC
1.8
0.0018
E16.5 retina
GGAGCTGTAG (
4
)
1.8
0.0018
E16.5 retina
GGGGAGCCAG (
4
)
1.8
0.0018
E18.5 retina
CTTCCCTAAT
18.2
0.0182
E18.5 retina
AGAGCTACTG
(
2
)
3.6
0.0036
E18.5 retina
CCACGTCATA
(
5
)
1.8
0.0018
E18.5 retina
TTCTTGGAAC (
4
)
1.8
0.0018
P0.5 retina
CTTCCCTAAT
7.9
0.0079
P0.5 retina
GGGGGCTCCC (
3
)
2
0.002
P2.5 retina
CTTCCCTAAT
15.8
0.0158
P2.5 retina
AGAGCTACTG
(
2
)
1.8
0.0018
P2.5 retina
GGGGGCTCCC (
3
)
1.8
0.0018
P4.5 retina
CTTCCCTAAT
13.9
0.0139
P4.5 retina
AGAGCTACTG
(
2
)
4
0.004
P4.5 retina
CCACGTCATA
(
5
)
2
0.002
P4.5 retina
GGAGCTGTAG (
4
)
2
0.002
P6.5 retina
CTTCCCTAAT
16.7
0.0167
P6.5 retina
AGAGCTACTG
(
2
)
1.7
0.0017
P10.5 crx- retina
CTTCCCTAAT
13
0.013
P10.5 crx- retina
GCCTCTACAC
9.3
0.0093
P10.5 crx- retina
GGAGCTGTAG (
4
)
1.9
0.0019
P10.5 crx- retina
TTCTTGGAAC (
4
)
1.9
0.0019
P10.5 crx+ retina
CTTCCCTAAT
7.7
0.0077
P10.5 crx+ retina
CCACGTCATA
(
5
)
1.9
0.0019
P10.5 crx+ retina
GCCTCTACAC
1.9
0.0019
P10.5 crx+ retina
GGAGCTGTAG (
4
)
1.9
0.0019
P10.5 crx+ retina
GGGGAGCCAG (
4
)
1.9
0.0019
Adult retinal
CTTCCCTAAT
5.6
0.0056
Adult retinal
GGAGCTGTAG (
4
)
1.9
0.0019
ONL
CTTCCCTAAT
11.5
0.0115
ONL
GGGGGCTCCC (
3
)
1.9
0.0019
