Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.280943	AI464196	expressed sequence AI464196	3		99653
Mm.280943	Mtx1	metaxin 1	3	3 44.2 cM	17827
Gene Ontology	integral to membrane | mitochondrion | outer membrane | protein transport | transport
Human Homolog	MTX1[metaxin 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTTGCCAGCC (4) 6.5 0.0065 P8 Cb GC GTTGGAGCAG (4) 4.9 0.0049 Cb medulloblastoma AAAGCAAAAT (7) 9.2 0.0092 Cb medulloblastoma GTTGCCAGCC (4) 6.9 0.0069 Cb medulloblastoma GTTGGAGCAG (4) 6.9 0.0069 Cb medulloblastoma TGCTCACACA (5) 2.3 0.0023 P8 GC+1d culture GTTGCCAGCC (4) 4.6 0.0046 P8 GC+1d culture GTTGGAGCAG (4) 4.6 0.0046 P8 GC+1d culture AAAGCAAAAT (7) 1.1 0.0011 P8 GC+1d culture GTTGGGAGCC (3) 1.1 0.0011 P8 GC+SHH+1d culture GTTGGAGCAG (4) 10.5 0.0105 P8 GC+SHH+1d culture AAAGCAAAAT (7) 5.9 0.0059 P8 GC+SHH+1d culture GGGAGACGAG (2) 1.2 0.0012 P8 GC+SHH+1d culture GTTGCCAGCC (4) 1.2 0.0012 3T3 fibroblasts GTTGGAGCAG (4) 3.5 0.0035 E15 cortex GTTGGAGCAG (4) 14.8 0.0148 E15 cortex AAAGCAAAAT (7) 4.9 0.0049 Hypothalamus AAAGCAAAAT (7) 5.4 0.0054 Hypothalamus GTTGGGAGCC (3) 3.6 0.0036 Hypothalamus TGCTCACACA (5) 1.8 0.0018 E12.5 retina GTTGGAGCAG (4) 9.4 0.0094 E12.5 retina GGGAGACGAG (2) 1.9 0.0019 E14.5 retina GTTGGAGCAG (4) 16.4 0.0164 E14.5 retina GGGAGACGAG (2) 3.6 0.0036 E14.5 retina GTTGCCAGCC (4) 3.6 0.0036 E14.5 retina AAAGCAAAAT (7) 1.8 0.0018 E16.5 retina AAAGCAAAAT (7) 5.4 0.0054 E16.5 retina GTTGGAGCAG (4) 5.4 0.0054 E16.5 retina GGGAGACGAG (2) 3.6 0.0036 E18.5 retina GTTGGAGCAG (4) 9.1 0.0091 E18.5 retina AAAGCAAAAT (7) 5.5 0.0055 E18.5 retina GTTGCCAGCC (4) 5.5 0.0055 P0.5 retina GTTGGAGCAG (4) 3.9 0.0039 P0.5 retina AAAGCAAAAT (7) 2 0.002 P2.5 retina GTTGGAGCAG (4) 14.1 0.0141 P2.5 retina AAAGCAAAAT (7) 5.3 0.0053 P2.5 retina TGCTCACACA (5) 3.5 0.0035 P4.5 retina GTTGGAGCAG (4) 23.8 0.0238 P4.5 retina AAAGCAAAAT (7) 9.9 0.0099 P4.5 retina GTTGCCAGCC (4) 2 0.002 P6.5 retina GTTGGAGCAG (4) 13.3 0.0133 P6.5 retina GTTGCCAGCC (4) 5 0.005 P10.5 crx- retina AAAGCAAAAT (7) 5.6 0.0056 P10.5 crx- retina GTTGCCAGCC (4) 5.6 0.0056 P10.5 crx- retina GTTGGAGCAG (4) 5.6 0.0056 P10.5 crx+ retina GTTGGAGCAG (4) 9.6 0.0096 P10.5 crx+ retina AAAGCAAAAT (7) 7.7 0.0077 P10.5 crx+ retina GTTGCCAGCC (4) 1.9 0.0019 P10.5 crx+ retina TGCTCACACA (5) 1.9 0.0019 Adult retinal AAAGCAAAAT (7) 7.4 0.0074 Adult retinal GTTGGAGCAG (4) 7.4 0.0074 Adult retinal GTTGCCAGCC (4) 1.9 0.0019 Adult retinal TGCTCACACA (5) 1.9 0.0019 ONL AAAGCAAAAT (7) 21.1 0.0211 ONL GTTGCCAGCC (4) 5.7 0.0057 ONL GTTGGAGCAG (4) 1.9 0.0019