Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.281019
D8Ertd563e
DNA segment, Chr 8, ERATO Doi 563, expressed
8
8 36.0 cM
52338
Mm.281019
1500041J02Rik
RIKEN cDNA 1500041J02 gene
1
67876
Human Homolog
FLJ13448[hypothetical protein FLJ13448]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 41 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAGGTTGG (
3
)
1.6
0.0016
P8 Cb GC
ATTTAATAAA (
11
)
1.6
0.0016
P8 Cb GC
CCATATGGCT
(
2
)
1.6
0.0016
Cb medulloblastoma
ACTTAATAAA
(
2
)
4.6
0.0046
Cb medulloblastoma
ATTTAATAAA (
11
)
4.6
0.0046
P8 GC+1d culture
AAAAGGTTGG (
3
)
3.4
0.0034
P8 GC+1d culture
ACTTCAGCCT
(
4
)
2.3
0.0023
P8 GC+1d culture
ATTTAATAAA (
11
)
2.3
0.0023
P8 GC+1d culture
ACTTAATAAA
(
2
)
1.1
0.0011
P8 GC+1d culture
CCATATGGCT
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
ACTTAATAAA
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
CCATATGGCT
(
2
)
1.2
0.0012
3T3 fibroblasts
CCATATGGCT
(
2
)
3.5
0.0035
P1 cortex
ATTTAATAAA (
11
)
4.5
0.0045
Hypothalamus
ACTTAATAAA
(
2
)
3.6
0.0036
Hypothalamus
CCATATGGCT
(
2
)
3.6
0.0036
Hypothalamus
AAAAGGTTGG (
3
)
1.8
0.0018
Hypothalamus
ATTTAATAAA (
11
)
1.8
0.0018
E12.5 retina
AAAAGGTTGG (
3
)
1.9
0.0019
E14.5 retina
ACTTAATAAA
(
2
)
3.6
0.0036
E14.5 retina
ATTTAATAAA (
11
)
1.8
0.0018
E16.5 retina
ATTTAATAAA (
11
)
1.8
0.0018
E18.5 retina
AAAAGGTTGG (
3
)
3.6
0.0036
E18.5 retina
ACTTAATAAA
(
2
)
1.8
0.0018
P0.5 retina
ACTTCAGCCT
(
4
)
2
0.002
P2.5 retina
ATTTAATAAA (
11
)
7
0.007
P2.5 retina
AAAAGGTTGG (
3
)
3.5
0.0035
P2.5 retina
CCATATGGCT
(
2
)
1.8
0.0018
P4.5 retina
ATTTAATAAA (
11
)
5.9
0.0059
P4.5 retina
ACTTAATAAA
(
2
)
2
0.002
P6.5 retina
ATTTAATAAA (
11
)
1.7
0.0017
P6.5 retina
CCATATGGCT
(
2
)
1.7
0.0017
P10.5 crx- retina
AAAAGGTTGG (
3
)
1.9
0.0019
P10.5 crx- retina
ACTTAATAAA
(
2
)
1.9
0.0019
P10.5 crx- retina
ATTTAATAAA (
11
)
1.9
0.0019
P10.5 crx+ retina
CCATATGGCT
(
2
)
3.8
0.0038
P10.5 crx+ retina
ACTTAATAAA
(
2
)
1.9
0.0019
P10.5 crx+ retina
ATTTAATAAA (
11
)
1.9
0.0019
Adult retinal
CCATATGGCT
(
2
)
3.7
0.0037
ONL
ATTTAATAAA (
11
)
7.7
0.0077
ONL
CCATATGGCT
(
2
)
1.9
0.0019
