Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.28128
2310066N05Rik
RIKEN cDNA 2310066N05 gene
3
70285
Human Homolog
RPF1[RNA processing factor 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 34 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AACTGTGTGA
TATTTGAACA
(
2
)
13.1
0.0131
Cb medulloblastoma
AACTGTGTGA
TATTTGAACA
(
2
)
11.5
0.0115
P8 GC+1d culture
AACTGTGTGA
TATTTGAACA
(
2
)
26.3
0.0263
P8 GC+SHH+1d culture
AACTGTGTGA
TATTTGAACA
(
2
)
17.6
0.0176
E15 cortex
AACTGTGTGA
19.8
0.0198
P1 cortex
AACTGTGTGA
4.5
0.0045
Hypothalamus
AACTGTGTGA
TATTTGAACA
(
2
)
7.2
0.0072
E12.5 retina
AACTGTGTGA
TATTTGAACA
(
2
)
7.5
0.0075
E14.5 retina
AACTGTGTGA
TATTTGAACA
(
2
)
9.1
0.0091
E16.5 retina
AACTGTGTGA
TATTTGAACA
(
2
)
12.6
0.0126
E18.5 retina
AACTGTGTGA
TATTTGAACA
(
2
)
11
0.011
P0.5 retina
AACTGTGTGA
2
0.002
P2.5 retina
TATTTGAACA
(
2
)
7
0.007
P4.5 retina
AACTGTGTGA
TATTTGAACA
(
2
)
7.9
0.0079
P6.5 retina
AACTGTGTGA
TATTTGAACA
(
2
)
6.7
0.0067
P10.5 crx- retina
AACTAGAAAG
AACTGTGTGA
TATTTGAACA
(
2
)
28
0.028
P10.5 crx+ retina
AACTGTGTGA
TATTTGAACA
(
2
)
5.7
0.0057
Adult retinal
AACTGTGTGA
TATTTGAACA
(
2
)
7.5
0.0075
ONL
TATTTGAACA
(
2
)
1.9
0.0019
