Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28145	2700061N24Rik	RIKEN cDNA 2700061N24 gene	13		72562
Human Homolog	DCOHM[dimerization cofactor of hepatocyte nuclear factor 1 ( HNF1) from muscle]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC TAAATAAAGA (6) 26.1 0.0261 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma TAAATAAAGA (6) 6.9 0.0069 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture TAAATAAAGA (6) 25.1 0.0251 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture TAAATAAAGA (6) 18.7 0.0187 P8 GC+SHH+1d culture TATACATTGT 1.2 0.0012 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 P1 cortex TAAAAAAAAA (196) 50 0.05 P1 cortex TAAATAAAGA (6) 18.2 0.0182 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus TAAATAAAGA (6) 7.2 0.0072 Hypothalamus TATACATTGT 3.6 0.0036 Hypothalamus CGAGGTGAGG 1.8 0.0018 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E12.5 retina TAAATAAAGA (6) 18.8 0.0188 E12.5 retina TATACATTGT 1.9 0.0019 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina TAAATAAAGA (6) 18.2 0.0182 E14.5 retina CGAGGTGAGG 1.8 0.0018 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E16.5 retina TAAATAAAGA (6) 21.7 0.0217 E16.5 retina TATACATTGT 7.2 0.0072 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina TAAATAAAGA (6) 25.5 0.0255 E18.5 retina TATACATTGT 5.5 0.0055 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P0.5 retina TAAATAAAGA (6) 2 0.002 P0.5 retina TATACATTGT 2 0.002 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina TAAATAAAGA (6) 26.4 0.0264 P2.5 retina TATACATTGT 1.8 0.0018 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina TAAATAAAGA (6) 47.6 0.0476 P4.5 retina CGAGGTGAGG 2 0.002 P4.5 retina TATACATTGT 2 0.002 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina TAAATAAAGA (6) 36.7 0.0367 P6.5 retina TATACATTGT 1.7 0.0017 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina TAAATAAAGA (6) 9.3 0.0093 P10.5 crx- retina TATACATTGT 5.6 0.0056 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina TAAATAAAGA (6) 3.8 0.0038 P10.5 crx+ retina TATACATTGT 1.9 0.0019 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal TAAATAAAGA (6) 1.9 0.0019 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL TAAATAAAGA (6) 13.4 0.0134