Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28160	C79375	EST C79375			107644
Mm.28160	R75405	expressed sequence R75405	13		97912
Mm.28160	Snx27	sorting nexin family member 27	3		76742
Human Homolog	SNX27[sorting nexin family member 27]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 63 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCAGACAGTA (3) 4.9 0.0049 P8 Cb GC TGGTGATATT (5) 3.3 0.0033 P8 Cb GC CCCCGCCTGG (5) 1.6 0.0016 P8 Cb GC GGAGACGAAA (4) 1.6 0.0016 P8 Cb GC TTTATTAAAA (6) 1.6 0.0016 Cb medulloblastoma TCAGACAGTA (3) 2.3 0.0023 Cb medulloblastoma TGGTGATATT (5) 2.3 0.0023 P8 GC+1d culture TGGTGATATT (5) 4.6 0.0046 P8 GC+1d culture TTTATTAAAA (6) 4.6 0.0046 P8 GC+1d culture TCAGACAGTA (3) 2.3 0.0023 P8 GC+1d culture ACCTCTCTCT (6) 1.1 0.0011 P8 GC+SHH+1d culture ACCTCTCTCT (6) 2.3 0.0023 P8 GC+SHH+1d culture TGGTGATATT (5) 2.3 0.0023 P8 GC+SHH+1d culture TTTATTAAAA (6) 2.3 0.0023 P8 GC+SHH+1d culture CTGTTCCTGA (3) 1.2 0.0012 P8 GC+SHH+1d culture GGAGACGAAA (4) 1.2 0.0012 P8 GC+SHH+1d culture TCAGACAGTA (3) 1.2 0.0012 E15 cortex CCCCGCCTGG (5) 4.9 0.0049 E15 cortex CTGTTCCTGA (3) 4.9 0.0049 P1 cortex TCAGACAGTA (3) 4.5 0.0045 Hypothalamus ACCTCTCTCT (6) 3.6 0.0036 Hypothalamus TTTATTAAAA (6) 3.6 0.0036 Hypothalamus GCTGGGAGGC (4) 1.8 0.0018 Hypothalamus TCAGACAGTA (3) 1.8 0.0018 E12.5 retina TCAGACAGTA (3) 5.6 0.0056 E12.5 retina TGGTGATATT (5) 3.8 0.0038 E12.5 retina CCCCGCCTGG (5) 1.9 0.0019 E12.5 retina CTGTTCCTGA (3) 1.9 0.0019 E12.5 retina GGAGACGAAA (4) 1.9 0.0019 E14.5 retina TTTATTAAAA (6) 7.3 0.0073 E14.5 retina CTGTTCCTGA (3) 1.8 0.0018 E14.5 retina TGGTGATATT (5) 1.8 0.0018 E16.5 retina TGGTGATATT (5) 3.6 0.0036 E16.5 retina TTTATTAAAA (6) 1.8 0.0018 E18.5 retina TCAGACAGTA (3) 3.6 0.0036 E18.5 retina ACCTCTCTCT (6) 1.8 0.0018 E18.5 retina CACACTTATA (3) 1.8 0.0018 E18.5 retina CTGTTCCTGA (3) 1.8 0.0018 E18.5 retina TGGTGATATT (5) 1.8 0.0018 P0.5 retina CACACTTATA (3) 3.9 0.0039 P0.5 retina TGGTGATATT (5) 2 0.002 P0.5 retina TTTATTAAAA (6) 2 0.002 P2.5 retina TGGTGATATT (5) 7 0.007 P2.5 retina CTGTTCCTGA (3) 1.8 0.0018 P4.5 retina CACACTTATA (3) 4 0.004 P4.5 retina ACCTCTCTCT (6) 2 0.002 P4.5 retina TTTATTAAAA (6) 2 0.002 P6.5 retina TTTATTAAAA (6) 8.3 0.0083 P6.5 retina TCAGACAGTA (3) 3.3 0.0033 P10.5 crx- retina CTGTTCCTGA (3) 1.9 0.0019 P10.5 crx- retina TCAGACAGTA (3) 1.9 0.0019 P10.5 crx- retina TGGTGATATT (5) 1.9 0.0019 P10.5 crx- retina TTTATTAAAA (6) 1.9 0.0019 P10.5 crx+ retina TTTATTAAAA (6) 7.7 0.0077 P10.5 crx+ retina CACACTTATA (3) 3.8 0.0038 P10.5 crx+ retina GGAGACGAAA (4) 1.9 0.0019 P10.5 crx+ retina TCAGACAGTA (3) 1.9 0.0019 P10.5 crx+ retina TGGTGATATT (5) 1.9 0.0019 Adult retinal TGGTGATATT (5) 7.4 0.0074 Adult retinal CACACTTATA (3) 1.9 0.0019 Adult retinal GCTGGGAGGC (4) 1.9 0.0019 ONL GCTGGGAGGC (4) 1.9 0.0019 ONL TTTATTAAAA (6) 1.9 0.0019