Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.282092	Dnajb1	DnaJ (Hsp40) homolog, subfamily B, member 1	8		81489
Gene Ontology	nucleus | protein folding | response to unfolded protein
Human Homolog	DNAJB1[DnaJ (Hsp40) homolog, subfamily B, member 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 51 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CACTGGCCTT (4) 6.5 0.0065 P8 Cb GC GCCTTGGTTT (5) 3.3 0.0033 P8 Cb GC TTTGCTGAGT (5) 3.3 0.0033 Cb medulloblastoma CACTGGCCTT (4) 4.6 0.0046 Cb medulloblastoma GCCTTGGTTT (5) 4.6 0.0046 Cb medulloblastoma CCTGTGCTCC (5) 2.3 0.0023 Cb medulloblastoma CTGCGGGAGG (2) 2.3 0.0023 P8 GC+1d culture CACTGGCCTT (4) 8 0.008 P8 GC+1d culture GCCTTGGTTT (5) 2.3 0.0023 P8 GC+1d culture CCTGTGCTCC (5) 1.1 0.0011 P8 GC+SHH+1d culture CACTGGCCTT (4) 7 0.007 P8 GC+SHH+1d culture GCCTTGGTTT (5) 3.5 0.0035 P8 GC+SHH+1d culture CCTTGTTCCT (4) 1.2 0.0012 P8 GC+SHH+1d culture TTTGCTGAGT (5) 1.2 0.0012 3T3 fibroblasts CACTGGCCTT (4) 24.5 0.0245 3T3 fibroblasts GCCTTGGTTT (5) 3.5 0.0035 E15 cortex CCTGTGCTCC (5) 4.9 0.0049 E15 cortex GCCTTGGTTT (5) 4.9 0.0049 E15 cortex TTTGCTGAGT (5) 4.9 0.0049 P1 cortex CACTGGCCTT (4) 9.1 0.0091 Hypothalamus CACTGGCCTT (4) 5.4 0.0054 Hypothalamus CTGCGGGAGG (2) 1.8 0.0018 Hypothalamus GCCTTGGTTT (5) 1.8 0.0018 E12.5 retina CACTGGCCTT (4) 7.5 0.0075 E12.5 retina GCCTTGGTTT (5) 5.6 0.0056 E14.5 retina GCCTTGGTTT (5) 3.6 0.0036 E16.5 retina GCCTTGGTTT (5) 3.6 0.0036 E16.5 retina ATTACGCCAA (233) 1.8 0.0018 E16.5 retina CACTGGCCTT (4) 1.8 0.0018 E16.5 retina CCTGTGCTCC (5) 1.8 0.0018 E18.5 retina CACTGGCCTT (4) 5.5 0.0055 E18.5 retina GCCTTGGTTT (5) 3.6 0.0036 E18.5 retina CTGCGGGAGG (2) 1.8 0.0018 P0.5 retina CACTGGCCTT (4) 3.9 0.0039 P0.5 retina ATTACGCCAA (233) 2 0.002 P0.5 retina GCCTTGGTTT (5) 2 0.002 P2.5 retina CACTGGCCTT (4) 1.8 0.0018 P4.5 retina GCCTTGGTTT (5) 5.9 0.0059 P4.5 retina CCTTGTTCCT (4) 2 0.002 P6.5 retina CACTGGCCTT (4) 10 0.01 P6.5 retina GCCTTGGTTT (5) 1.7 0.0017 P10.5 crx- retina GCCTTGGTTT (5) 14.9 0.0149 P10.5 crx- retina CACTGGCCTT (4) 1.9 0.0019 P10.5 crx+ retina CACTGGCCTT (4) 17.3 0.0173 P10.5 crx+ retina GCCTTGGTTT (5) 9.6 0.0096 Adult retinal CACTGGCCTT (4) 11.1 0.0111 Adult retinal GCCTTGGTTT (5) 7.4 0.0074 Adult retinal ATTACGCCAA (233) 3.7 0.0037 Adult retinal CCTTGTTCCT (4) 1.9 0.0019 ONL GCCTTGGTTT (5) 9.6 0.0096 ONL CACTGGCCTT (4) 7.7 0.0077