Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28235	Rnf7	ring finger protein 7	9		19823
Gene Ontology	anti-apoptosis | apoptotic mitochondrial changes | caspase activation | cytoplasm | induction of apoptosis by oxidative stress | nucleus | protein ubiquitination | ubiquitin ligase complex | ubiquitin-protein ligase activity | zinc ion binding
Human Homolog	RNF7[ring finger protein 7]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 79 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GATTTTATTT (5) 16.3 0.0163 P8 Cb GC TCCCTGTGGG (6) 3.3 0.0033 P8 Cb GC TCCTGTGGGT (5) 3.3 0.0033 P8 Cb GC TGGAGCTGGG (6) 3.3 0.0033 P8 Cb GC AGAGCTACTG (2) 1.6 0.0016 P8 Cb GC TGAGTGAAAC (3) 1.6 0.0016 Cb medulloblastoma GATTTTATTT (5) 13.9 0.0139 Cb medulloblastoma TCCTGTGGGT (5) 11.6 0.0116 Cb medulloblastoma TAAACATCTT (4) 2.3 0.0023 Cb medulloblastoma TGGAGCTGGG (6) 2.3 0.0023 P8 GC+1d culture GATTTTATTT (5) 14.8 0.0148 P8 GC+1d culture TAAACATCTT (4) 3.4 0.0034 P8 GC+1d culture TCCTGTGGGT (5) 3.4 0.0034 P8 GC+1d culture TCCCTGTGGG (6) 2.3 0.0023 P8 GC+1d culture AGAGCTACTG (2) 1.1 0.0011 P8 GC+1d culture TGGAGCTGGG (6) 1.1 0.0011 P8 GC+SHH+1d culture GATTTTATTT (5) 28.1 0.0281 P8 GC+SHH+1d culture TCCTGTGGGT (5) 7 0.007 P8 GC+SHH+1d culture TAAACATCTT (4) 4.7 0.0047 P8 GC+SHH+1d culture AGAGCTACTG (2) 1.2 0.0012 P8 GC+SHH+1d culture GCCAGGAAGC (6) 1.2 0.0012 P8 GC+SHH+1d culture TCCCTGTGGG (6) 1.2 0.0012 3T3 fibroblasts TCCCTGTGGG (6) 17.5 0.0175 E15 cortex GATTTTATTT (5) 9.9 0.0099 E15 cortex GCCAGGAAGC (6) 9.9 0.0099 P1 cortex GATTTTATTT (5) 9.1 0.0091 Hypothalamus GATTTTATTT (5) 10.9 0.0109 Hypothalamus AGAGCTACTG (2) 3.6 0.0036 Hypothalamus TGAGTGAAAC (3) 3.6 0.0036 Hypothalamus TCCTGTGGGT (5) 1.8 0.0018 E12.5 retina GATTTTATTT (5) 7.5 0.0075 E12.5 retina AGAGCTACTG (2) 3.8 0.0038 E12.5 retina TCCCTGTGGG (6) 1.9 0.0019 E12.5 retina TCCTGTGGGT (5) 1.9 0.0019 E12.5 retina TGGAGCTGGG (6) 1.9 0.0019 E14.5 retina GATTTTATTT (5) 12.8 0.0128 E14.5 retina TCCTGTGGGT (5) 5.5 0.0055 E14.5 retina AGAGCTACTG (2) 1.8 0.0018 E14.5 retina GCCAGGAAGC (6) 1.8 0.0018 E14.5 retina TGAGTGAAAC (3) 1.8 0.0018 E16.5 retina TCCTGTGGGT (5) 5.4 0.0054 E16.5 retina GATTTTATTT (5) 3.6 0.0036 E16.5 retina GGGGGTGGAG (6) 1.8 0.0018 E16.5 retina TGAGTGAAAC (3) 1.8 0.0018 E18.5 retina GATTTTATTT (5) 20 0.02 E18.5 retina AGAGCTACTG (2) 3.6 0.0036 E18.5 retina TCCCTGTGGG (6) 3.6 0.0036 E18.5 retina TCCTGTGGGT (5) 3.6 0.0036 E18.5 retina TGGAGCTGGG (6) 1.8 0.0018 P0.5 retina GATTTTATTT (5) 5.9 0.0059 P0.5 retina TCCCTGTGGG (6) 3.9 0.0039 P0.5 retina TCCTGTGGGT (5) 2 0.002 P2.5 retina GATTTTATTT (5) 12.3 0.0123 P2.5 retina TCCTGTGGGT (5) 5.3 0.0053 P2.5 retina AGAGCTACTG (2) 1.8 0.0018 P2.5 retina TCCCTGTGGG (6) 1.8 0.0018 P4.5 retina GATTTTATTT (5) 13.9 0.0139 P4.5 retina TCCTGTGGGT (5) 9.9 0.0099 P4.5 retina AGAGCTACTG (2) 4 0.004 P4.5 retina TAAACATCTT (4) 2 0.002 P4.5 retina TCCCTGTGGG (6) 2 0.002 P6.5 retina GATTTTATTT (5) 5 0.005 P6.5 retina AGAGCTACTG (2) 1.7 0.0017 P6.5 retina TAAACATCTT (4) 1.7 0.0017 P6.5 retina TCCCTGTGGG (6) 1.7 0.0017 P6.5 retina TCCTGTGGGT (5) 1.7 0.0017 P10.5 crx- retina GATTTTATTT (5) 18.6 0.0186 P10.5 crx- retina TCCCTGTGGG (6) 3.7 0.0037 P10.5 crx+ retina GATTTTATTT (5) 5.8 0.0058 P10.5 crx+ retina GGGGGTGGAG (6) 1.9 0.0019 P10.5 crx+ retina TAAACATCTT (4) 1.9 0.0019 P10.5 crx+ retina TCCTGTGGGT (5) 1.9 0.0019 Adult retinal GATTTTATTT (5) 3.7 0.0037 Adult retinal TCCCTGTGGG (6) 3.7 0.0037 Adult retinal GGGGGTGGAG (6) 1.9 0.0019 Adult retinal TAAACATCTT (4) 1.9 0.0019 Adult retinal TCCTGTGGGT (5) 1.9 0.0019 ONL GATTTTATTT (5) 9.6 0.0096 ONL TCCTGTGGGT (5) 5.7 0.0057