Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.28240 Snx6sorting nexin 6 12    72183 
 Gene Ontology intracellular protein transport | protein transport | protein transporter activity | transport
 Human Homolog SNX6[sorting nexin 6]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCCAGGCAAAAC (40)11.40.0114
P8 Cb GCCTCCTTGTAT9.80.0098
P8 Cb GCAGGTGTTCCT3.30.0033
P8 Cb GCGTGGCAACTA (2)1.60.0016
Cb medulloblastomaCTCCTTGTAT9.20.0092
Cb medulloblastomaCAGGCAAAAC (40)4.60.0046
Cb medulloblastomaAGGTGTTCCT2.30.0023
P8 GC+1d cultureCTCCTTGTAT6.80.0068
P8 GC+1d cultureCAGGCAAAAC (40)5.70.0057
P8 GC+1d cultureGTTAAGTCAG (2)1.10.0011
P8 GC+SHH+1d cultureCAGGCAAAAC (40)11.70.0117
P8 GC+SHH+1d cultureCTCCTTGTAT4.70.0047
P8 GC+SHH+1d cultureAAAGAACTAA1.20.0012
3T3 fibroblastsCAGGCAAAAC (40)10.50.0105
3T3 fibroblastsCTCCTTGTAT3.50.0035
3T3 fibroblastsGTTAAGTCAG (2)3.50.0035
E15 cortexAGGTGTTCCT9.90.0099
E15 cortexCAGGCAAAAC (40)4.90.0049
P1 cortexCAGGCAAAAC (40)9.10.0091
P1 cortexAGGTGTTCCT4.50.0045
P1 cortexCTCCTTGTAT4.50.0045
HypothalamusCAGGCAAAAC (40)5.40.0054
HypothalamusCTCCTTGTAT3.60.0036
HypothalamusAAAGAACTAA1.80.0018
HypothalamusAGGTGTTCCT1.80.0018
HypothalamusGTGGCAACTA (2)1.80.0018
E12.5 retinaCAGGCAAAAC (40)20.70.0207
E12.5 retinaCTCCTTGTAT11.30.0113
E12.5 retinaGTTAAGTCAG (2)5.60.0056
E12.5 retinaAAAGAACTAA1.90.0019
E12.5 retinaGTGGCAACTA (2)1.90.0019
E14.5 retinaCAGGCAAAAC (40)12.80.0128
E14.5 retinaCTCCTTGTAT5.50.0055
E16.5 retinaCAGGCAAAAC (40)9.10.0091
E16.5 retinaCTCCTTGTAT9.10.0091
E16.5 retinaGTGGCAACTA (2)3.60.0036
E16.5 retinaGTTAAGTCAG (2)1.80.0018
E18.5 retinaCAGGCAAAAC (40)12.70.0127
E18.5 retinaGTGGCAACTA (2)1.80.0018
P0.5 retinaCAGGCAAAAC (40)13.70.0137
P0.5 retinaCTCCTTGTAT7.90.0079
P2.5 retinaCAGGCAAAAC (40)24.60.0246
P2.5 retinaCTCCTTGTAT5.30.0053
P4.5 retinaCAGGCAAAAC (40)13.90.0139
P4.5 retinaCTCCTTGTAT9.90.0099
P4.5 retinaAAAGAACTAA20.002
P4.5 retinaGTGGCAACTA (2)20.002
P6.5 retinaCAGGCAAAAC (40)16.70.0167
P6.5 retinaCTCCTTGTAT50.005
P6.5 retinaGTGGCAACTA (2)50.005
P10.5 crx- retinaCAGGCAAAAC (40)11.10.0111
P10.5 crx- retinaGTGGCAACTA (2)1.90.0019
P10.5 crx+ retinaCAGGCAAAAC (40)13.50.0135
P10.5 crx+ retinaCTCCTTGTAT7.70.0077
P10.5 crx+ retinaAGGTGTTCCT1.90.0019
Adult retinalCAGGCAAAAC (40)11.10.0111
Adult retinalAAAGAACTAA1.90.0019
Adult retinalCTCCTTGTAT1.90.0019
ONLCAGGCAAAAC (40)34.50.0345