Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28251	2210038L17Rik	RIKEN cDNA 2210038L17 gene	17		78646
Mm.28251	Tulp4	tubby like protein 4	17	17 3.2 cM	68842
Gene Ontology	cytoplasm | intracellular signaling cascade | molecular_function unknown
Human Homolog	TULP4[tubby like protein 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 79 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTTTTTCTT (8) 4.9 0.0049 P8 Cb GC TTCTGGAATA (6) 4.9 0.0049 P8 Cb GC CAGACAGACA (12) 1.6 0.0016 P8 Cb GC GCCAGGCCCA (4) 1.6 0.0016 P8 Cb GC GGCACAGAGG (3) 1.6 0.0016 P8 Cb GC GGTTCCACGT (3) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAT (25) 4.6 0.0046 Cb medulloblastoma TTCTGGAATA (6) 4.6 0.0046 Cb medulloblastoma TACGAATTAA (4) 2.3 0.0023 P8 GC+1d culture TTCTGGAATA (6) 10.3 0.0103 P8 GC+1d culture TTCTTGTCCA (2) 10.3 0.0103 P8 GC+1d culture TGTTTTTCTT (8) 8 0.008 P8 GC+1d culture AAAAAAAAAT (25) 3.4 0.0034 P8 GC+1d culture CAGACAGACA (12) 1.1 0.0011 P8 GC+1d culture TTTGCAAAAT (2) 1.1 0.0011 P8 GC+SHH+1d culture TGTTTTTCTT (8) 11.7 0.0117 P8 GC+SHH+1d culture TTCTGGAATA (6) 10.5 0.0105 P8 GC+SHH+1d culture AAAAAAAAAT (25) 5.9 0.0059 P8 GC+SHH+1d culture GGCACAGAGG (3) 1.2 0.0012 P8 GC+SHH+1d culture TACGAATTAA (4) 1.2 0.0012 P8 GC+SHH+1d culture TGTGGCTTTT (5) 1.2 0.0012 3T3 fibroblasts TTCTTGTCCA (2) 3.5 0.0035 E15 cortex TGTTTTTCTT (8) 4.9 0.0049 E15 cortex TTTGCAAAAT (2) 4.9 0.0049 P1 cortex AAAAAAAAAT (25) 9.1 0.0091 P1 cortex TGTGGCTTTT (5) 4.5 0.0045 P1 cortex TGTTTTTCTT (8) 4.5 0.0045 P1 cortex TTCTGGAATA (6) 4.5 0.0045 Hypothalamus TTCTGGAATA (6) 5.4 0.0054 Hypothalamus GCCAGGCCCA (4) 1.8 0.0018 Hypothalamus TGTGGCTTTT (5) 1.8 0.0018 E12.5 retina TTCTGGAATA (6) 5.6 0.0056 E12.5 retina GGTTCCACGT (3) 1.9 0.0019 E12.5 retina TTCTTGTCCA (2) 1.9 0.0019 E14.5 retina TTCTGGAATA (6) 7.3 0.0073 E14.5 retina AAAAAAAAAT (25) 5.5 0.0055 E14.5 retina TGTTTTTCTT (8) 3.6 0.0036 E14.5 retina GCCAGGCCCA (4) 1.8 0.0018 E16.5 retina TTCTGGAATA (6) 7.2 0.0072 E16.5 retina CTTTTCTACA (4) 3.6 0.0036 E16.5 retina AAAAAAAAAT (25) 1.8 0.0018 E16.5 retina TGTTTTTCTT (8) 1.8 0.0018 E16.5 retina TTCTTGTCCA (2) 1.8 0.0018 E18.5 retina AAAAAAAAAT (25) 7.3 0.0073 E18.5 retina TGTTTTTCTT (8) 5.5 0.0055 E18.5 retina TTCTGGAATA (6) 5.5 0.0055 P0.5 retina TGTTTTTCTT (8) 7.9 0.0079 P0.5 retina AAAAAAAAAT (25) 3.9 0.0039 P0.5 retina TTCTTGTCCA (2) 3.9 0.0039 P0.5 retina TTCTGGAATA (6) 2 0.002 P2.5 retina TTCTGGAATA (6) 7 0.007 P2.5 retina AAAAAAAAAT (25) 3.5 0.0035 P2.5 retina TACGAATTAA (4) 1.8 0.0018 P2.5 retina TTCTTGTCCA (2) 1.8 0.0018 P2.5 retina TTTGCAAAAT (2) 1.8 0.0018 P4.5 retina AAAAAAAAAT (25) 4 0.004 P4.5 retina TTCTGGAATA (6) 2 0.002 P4.5 retina TTCTTGTCCA (2) 2 0.002 P6.5 retina CAGACAGACA (12) 1.7 0.0017 P6.5 retina TGTTTTTCTT (8) 1.7 0.0017 P6.5 retina TTCTTGTCCA (2) 1.7 0.0017 P10.5 crx- retina TTCTGGAATA (6) 5.6 0.0056 P10.5 crx- retina AAAAAAAAAT (25) 3.7 0.0037 P10.5 crx- retina TGTGGCTTTT (5) 1.9 0.0019 P10.5 crx- retina TTCTTGTCCA (2) 1.9 0.0019 P10.5 crx+ retina TTCTGGAATA (6) 3.8 0.0038 P10.5 crx+ retina TTCTTGTCCA (2) 3.8 0.0038 P10.5 crx+ retina CAGACAGACA (12) 1.9 0.0019 P10.5 crx+ retina GGTTCCACGT (3) 1.9 0.0019 Adult retinal TTCTTGTCCA (2) 9.3 0.0093 Adult retinal AAAAAAAAAT (25) 1.9 0.0019 Adult retinal GGCACAGAGG (3) 1.9 0.0019 Adult retinal TTCTGGAATA (6) 1.9 0.0019 ONL TTCTGGAATA (6) 5.7 0.0057 ONL AAAAAAAAAT (25) 1.9 0.0019 ONL CTTTTCTACA (4) 1.9 0.0019 ONL TGTTTTTCTT (8) 1.9 0.0019 ONL TTCTTGTCCA (2) 1.9 0.0019 ONL TTTGCAAAAT (2) 1.9 0.0019