Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28251	2210038L17Rik	RIKEN cDNA 2210038L17 gene	17		78646
Mm.28251	Tulp4	tubby like protein 4	17	17 3.2 cM	68842
Gene Ontology	cytoplasm | intracellular signaling cascade | molecular_function unknown
Human Homolog	TULP4[tubby like protein 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 79 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGACAGACA (5) GCCAGGCCCA GGCACAGAGG (2) GGTTCCACGT TGTTTTTCTT (3) TTCTGGAATA 16.2 0.0162 Cb medulloblastoma AAAAAAAAAT (2) TACGAATTAA (2) TTCTGGAATA 11.5 0.0115 P8 GC+1d culture AAAAAAAAAT (2) CAGACAGACA (5) TGTTTTTCTT (3) TTCTGGAATA TTCTTGTCCA (2) TTTGCAAAAT (2) 34.2 0.0342 P8 GC+SHH+1d culture AAAAAAAAAT (2) GGCACAGAGG (2) TACGAATTAA (2) TGTGGCTTTT (2) TGTTTTTCTT (3) TTCTGGAATA 31.7 0.0317 3T3 fibroblasts TTCTTGTCCA (2) 3.5 0.0035 E15 cortex TGTTTTTCTT (3) TTTGCAAAAT (2) 9.8 0.0098 P1 cortex AAAAAAAAAT (2) TGTGGCTTTT (2) TGTTTTTCTT (3) TTCTGGAATA 22.6 0.0226 Hypothalamus GCCAGGCCCA TGTGGCTTTT (2) TTCTGGAATA 9 0.009 E12.5 retina GGTTCCACGT TTCTGGAATA TTCTTGTCCA (2) 9.4 0.0094 E14.5 retina AAAAAAAAAT (2) GCCAGGCCCA TGTTTTTCTT (3) TTCTGGAATA 18.2 0.0182 E16.5 retina AAAAAAAAAT (2) CTTTTCTACA TGTTTTTCTT (3) TTCTGGAATA TTCTTGTCCA (2) 16.2 0.0162 E18.5 retina AAAAAAAAAT (2) TGTTTTTCTT (3) TTCTGGAATA 18.3 0.0183 P0.5 retina AAAAAAAAAT (2) TGTTTTTCTT (3) TTCTGGAATA TTCTTGTCCA (2) 17.7 0.0177 P2.5 retina AAAAAAAAAT (2) TACGAATTAA (2) TTCTGGAATA TTCTTGTCCA (2) TTTGCAAAAT (2) 15.9 0.0159 P4.5 retina AAAAAAAAAT (2) TTCTGGAATA TTCTTGTCCA (2) 8 0.008 P6.5 retina CAGACAGACA (5) TGTTTTTCTT (3) TTCTTGTCCA (2) 5.1 0.0051 P10.5 crx- retina AAAAAAAAAT (2) TGTGGCTTTT (2) TTCTGGAATA TTCTTGTCCA (2) 13.1 0.0131 P10.5 crx+ retina CAGACAGACA (5) GGTTCCACGT TTCTGGAATA TTCTTGTCCA (2) 11.4 0.0114 Adult retinal AAAAAAAAAT (2) GGCACAGAGG (2) TTCTGGAATA TTCTTGTCCA (2) 15 0.015 ONL AAAAAAAAAT (2) CTTTTCTACA TGTTTTTCTT (3) TTCTGGAATA TTCTTGTCCA (2) TTTGCAAAAT (2) 15.2 0.0152