Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.282556	Npc2	Niemann Pick type C2	12		67963
Gene Ontology	extracellular space
Human Homolog	NPC2[Niemann-Pick disease, type C2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 124 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTTACCC GAAAAAAAAA (2) GACACCAACT (2) GACGGAGTGG GCTGTTTGCT (2) GCTTGTTTGC TAAGATTGAG TGGTTGCTGG 127.2 0.1272 Cb medulloblastoma CTGTTTTATG (2) GAAAAAAAAA (2) GACACCAACT (2) GCTGTTGCTG (2) GCTGTTTGCT (2) TAAGATTGAG TGGTTGCTGG 300.5 0.3005 P8 GC+1d culture CAGAGAGAGG CCTTTTACCC CTGGTTGCTG (2) GAAAAAAAAA (2) GACACCAACT (2) GACACCAATC (2) GCATCCTGGA GCTGTTTGCT (2) TAAGATTGAG TGGTTGCTGG 139.2 0.1392 P8 GC+SHH+1d culture CAGAGAGAGG CCTTTTACCC CTGGTTGCTG (2) CTGTTTTATG (2) GAAAAAAAAA (2) GCATCCTGGA GCTGTTTGCT (2) TAAGATTGAG TGGTTGCTGG 207.3 0.2073 3T3 fibroblasts CCTTTTACCC CTGGTTGCTG (2) GACACCAATC (2) GCTGTTTGCT (2) TGGTTGCTGG 269.9 0.2699 E15 cortex GAAAAAAAAA (2) GACGGAGTGG GCTGTTTGCT (2) TAAGATTGAG TGGTTGCTGG 351.2 0.3512 P1 cortex GAAAAAAAAA (2) TGGTTGCTGG 131.9 0.1319 Hypothalamus CAGAGAGAGG CCTTTTACCC CTGGTTGCTG (2) CTGTTTTATG (2) GAAAAAAAAA (2) GCTGTTTGCT (2) TAAGATTGAG TGGTTGCTGG TTTGTTTGCT 443.6 0.4436 E12.5 retina CCTTTTACCC CTGTTTTATG (2) GAAAAAAAAA (2) GCATCCTGGA GCTTGTTTGC TAAGATTGAG TGGTTGCTGG 219.7 0.2197 E14.5 retina CTGGTTGCTG (2) GAAAAAAAAA (2) GACACCAATC (2) GACGGAGTGG GCTGTTTGCT (2) TAAGATTGAG TGGTTGCTGG 983.8 0.9838 E16.5 retina CTGGTTGCTG (2) GAAAAAAAAA (2) GACACCAATC (2) GCTGTTTGCT (2) GCTTGTTTGC TAAGATTGAG TGGTTGCTGG 805.8 0.8058 E18.5 retina GAAAAAAAAA (2) TAAGATTGAG TGGTTGCTGG 329.2 0.3292 P0.5 retina CCTTTTACCC CTGGTTGCTG (2) CTGTTTTATG (2) GAAAAAAAAA (2) GCATCCTGGA GCTGTTTGCT (2) TAAGATTGAG TGGTTGCTGG 247.4 0.2474 P2.5 retina CAGAGAGAGG GAAAAAAAAA (2) GACACCAATC (2) TAAGATTGAG TGGTTGCTGG TTTGTTTGCT 264 0.264 P4.5 retina CTGTTTTATG (2) GAAAAAAAAA (2) GACACCAATC (2) TAAGATTGAG TGGTTGCTGG 214 0.214 P6.5 retina GAAAAAAAAA (2) GCTGTTGCTG (2) TAAGATTGAG TGGTTGCTGG 200.1 0.2001 P10.5 crx- retina CTGGTTGCTG (2) GAAAAAAAAA (2) GCTGTTGCTG (2) TAAGATTGAG TGGTTGCTGG 308.4 0.3084 P10.5 crx+ retina CAGAGAGAGG CTGGTTGCTG (2) CTGTTTTATG (2) GAAAAAAAAA (2) GCTGTTTGCT (2) TGGTTGCTGG 153.7 0.1537 Adult retinal CCTTTTACCC CTGTTTTATG (2) GAAAAAAAAA (2) GCTGTTGCTG (2) TAAGATTGAG TGGTTGCTGG TTTGTTTGCT 246.5 0.2465 ONL CCTTTTACCC GAAAAAAAAA (2) GACACCAACT (2) TGGTTGCTGG 430.9 0.4309