Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.282700	Harsl	histidyl-tRNA synthetase-like	18		70791
Gene Ontology	ATP binding | cytoplasm | extracellular space | histidine-tRNA ligase activity | histidyl-tRNA aminoacylation | protein biosynthesis | tRNA aminoacylation for protein translation | tRNA ligase activity
Human Homolog	HARSL[histidyl-tRNA synthetase-like]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 55 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTCTTTGG (6) 8.2 0.0082 Cb medulloblastoma GTGGTGCACA (18) 4.6 0.0046 P8 GC+1d culture AGATGGTGGC (2) 1.1 0.0011 P8 GC+1d culture GTGGTGCACA (18) 1.1 0.0011 P8 GC+SHH+1d culture GTGGTGCACA (18) 4.7 0.0047 P8 GC+SHH+1d culture TGGTCTTTGG (6) 1.2 0.0012 3T3 fibroblasts GTGGTGCACA (18) 14 0.014 E15 cortex GTGGTGCACA (18) 24.7 0.0247 E15 cortex ACCTGGAGAT (4) 4.9 0.0049 P1 cortex GTGGTGCACA (18) 13.6 0.0136 Hypothalamus ACCTGGAGAT (4) 3.6 0.0036 Hypothalamus GTGGTGCACA (18) 3.6 0.0036 Hypothalamus TGGTCTTTGG (6) 3.6 0.0036 Hypothalamus AGATGGTGGC (2) 1.8 0.0018 E12.5 retina GTGGTGCACA (18) 3.8 0.0038 E12.5 retina GAGTGTTGAA (2) 1.9 0.0019 E14.5 retina GTGGTGCACA (18) 7.3 0.0073 E14.5 retina AGATGCTCTC 1.8 0.0018 E16.5 retina AGATGCTCTC 7.2 0.0072 E16.5 retina GTGGTGCACA (18) 3.6 0.0036 E16.5 retina ACCTGGAGAT (4) 1.8 0.0018 E18.5 retina TGGTCTTTGG (6) 5.5 0.0055 E18.5 retina GTGGTGCACA (18) 3.6 0.0036 P0.5 retina GTGGTGCACA (18) 3.9 0.0039 P0.5 retina TGGTCTTTGG (6) 3.9 0.0039 P0.5 retina ACCTGGAGAT (4) 2 0.002 P0.5 retina AGATGCTCTC 2 0.002 P2.5 retina GTGGTGCACA (18) 7 0.007 P2.5 retina AGATGGTGGC (2) 5.3 0.0053 P2.5 retina ACCTGGAGAT (4) 1.8 0.0018 P2.5 retina AGATGCTCTC 1.8 0.0018 P4.5 retina AGATGGTGGC (2) 5.9 0.0059 P4.5 retina AGATGCTCTC 4 0.004 P4.5 retina GTGGTGCACA (18) 4 0.004 P4.5 retina ACCTGGAGAT (4) 2 0.002 P6.5 retina ACCTGGAGAT (4) 10 0.01 P6.5 retina AGATGGTGGC (2) 5 0.005 P6.5 retina GTGGTGCACA (18) 5 0.005 P6.5 retina AGATGCTCTC 3.3 0.0033 P6.5 retina GAGTGTTGAA (2) 1.7 0.0017 P6.5 retina TGGTCTTTGG (6) 1.7 0.0017 P10.5 crx- retina AGATGGTGGC (2) 14.9 0.0149 P10.5 crx- retina ACCTGGAGAT (4) 1.9 0.0019 P10.5 crx+ retina AGATGGTGGC (2) 7.7 0.0077 P10.5 crx+ retina GTGGTGCACA (18) 5.8 0.0058 P10.5 crx+ retina ACCTGGAGAT (4) 1.9 0.0019 P10.5 crx+ retina AGATGCTCTC 1.9 0.0019 P10.5 crx+ retina GAGTGTTGAA (2) 1.9 0.0019 Adult retinal GTGGTGCACA (18) 9.3 0.0093 Adult retinal TGGTCTTTGG (6) 3.7 0.0037 Adult retinal AGATGGTGGC (2) 1.9 0.0019 Adult retinal GAGTGTTGAA (2) 1.9 0.0019 ONL GTGGTGCACA (18) 11.5 0.0115 ONL AGATGCTCTC 1.9 0.0019 ONL GAGTGTTGAA (2) 1.9 0.0019