Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.282900	Pdlim3	PDZ and LIM domain 3	8		53318
Gene Ontology	actin cytoskeleton | actin filament organization | cytoskeletal protein binding | intracellular signaling cascade | muscle development | protein binding | structural constituent of muscle | structural constituent of muscle | Z disc
Human Homolog	PDLIM3[PDZ and LIM domain 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 55 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC TTTTTGTAAA (7) 3.3 0.0033 P8 Cb GC CTCCCTCTGT (4) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture TTTTTGTAAA (7) 5.7 0.0057 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture TGTCTGAAGA (4) 1.2 0.0012 P8 GC+SHH+1d culture TGTGCGTGAG (3) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex TTTTTGTAAA (7) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus GGAACCAACA (4) 5.4 0.0054 Hypothalamus TTTTTGTAAA (7) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina TTTTTGTAAA (7) 11.3 0.0113 E12.5 retina TGTCTGAAGA (4) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina TTTTTGTAAA (7) 7.3 0.0073 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina GGAACCAACA (4) 1.8 0.0018 E16.5 retina TGTGCGTGAG (3) 1.8 0.0018 E16.5 retina TTTTTGTAAA (7) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina TTTTTGTAAA (7) 3.6 0.0036 E18.5 retina TGTGCGTGAG (3) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina GGAACCAACA (4) 3.9 0.0039 P0.5 retina CTCCCTCTGT (4) 2 0.002 P0.5 retina TTTTTGTAAA (7) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina TGTCTGAAGA (4) 7 0.007 P2.5 retina TTTTTGTAAA (7) 7 0.007 P2.5 retina GGAACCAACA (4) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina TTTTTGTAAA (7) 9.9 0.0099 P4.5 retina CTGATGCACA (2) 4 0.004 P4.5 retina GGAACCAACA (4) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina CTCCCTCTGT (4) 3.3 0.0033 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina TTTTTGTAAA (7) 9.3 0.0093 P10.5 crx- retina CTGATGCACA (2) 3.7 0.0037 P10.5 crx- retina GGAACCAACA (4) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina TTTTTGTAAA (7) 3.8 0.0038 P10.5 crx+ retina TGTCTGAAGA (4) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal TGTCTGAAGA (4) 1.9 0.0019 Adult retinal TGTGCGTGAG (3) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL TTTTTGTAAA (7) 3.8 0.0038 ONL TGTCTGAAGA (4) 1.9 0.0019