Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28308	Nkx6-2	NK6 transcription factor related, locus 2 (Drosophila)	7	7 68.0 cM	14912
Gene Ontology	nucleus | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex
Human Homolog	NKX6-2[NK6 transcription factor related, locus 2 (Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 45 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGAAAAAAA (22) 4.9 0.0049 P8 Cb GC GCAGTCACAG (6) 1.6 0.0016 Cb medulloblastoma GTGAAAAAAA (22) 43.9 0.0439 Cb medulloblastoma GTGAAAACAA (4) 27.7 0.0277 Cb medulloblastoma GCAGTCACAG (6) 4.6 0.0046 Cb medulloblastoma CCCCGACGCC 2.3 0.0023 P8 GC+1d culture GTGAAAAAAA (22) 6.8 0.0068 P8 GC+1d culture CCCCGACGCC 1.1 0.0011 P8 GC+SHH+1d culture GTGAAAAAAA (22) 10.5 0.0105 P8 GC+SHH+1d culture GTGAAAACAA (4) 4.7 0.0047 P8 GC+SHH+1d culture GCAGTCACAG (6) 1.2 0.0012 P1 cortex GCAGTCACAG (6) 4.5 0.0045 Hypothalamus GTGAAAAAAA (22) 18.1 0.0181 Hypothalamus GCAGTCACAG (6) 9.1 0.0091 Hypothalamus AGCGGAGCCA (2) 1.8 0.0018 Hypothalamus CCCCGACGCC 1.8 0.0018 E12.5 retina GTGAAAAAAA (22) 11.3 0.0113 E12.5 retina GTGAAAACAA (4) 1.9 0.0019 E14.5 retina GTGAAAAAAA (22) 12.8 0.0128 E14.5 retina GTGAAAACAA (4) 3.6 0.0036 E14.5 retina GCAGTCACAG (6) 1.8 0.0018 E16.5 retina GTGAAAAAAA (22) 5.4 0.0054 E16.5 retina GCAGTCACAG (6) 1.8 0.0018 E16.5 retina GTGAAAACAA (4) 1.8 0.0018 E18.5 retina GTGAAAAAAA (22) 20 0.02 E18.5 retina GTGAAAACAA (4) 3.6 0.0036 P0.5 retina GTGAAAAAAA (22) 7.9 0.0079 P2.5 retina GTGAAAAAAA (22) 10.6 0.0106 P2.5 retina GTGAAAACAA (4) 3.5 0.0035 P2.5 retina AGCGGAGCCA (2) 1.8 0.0018 P4.5 retina GTGAAAAAAA (22) 23.8 0.0238 P4.5 retina GTGAAAACAA (4) 7.9 0.0079 P6.5 retina GTGAAAACAA (4) 6.7 0.0067 P6.5 retina GTGAAAAAAA (22) 5 0.005 P6.5 retina GCAGTCACAG (6) 1.7 0.0017 P10.5 crx- retina GTGAAAAAAA (22) 3.7 0.0037 P10.5 crx- retina GCAGTCACAG (6) 1.9 0.0019 P10.5 crx+ retina GTGAAAAAAA (22) 5.8 0.0058 P10.5 crx+ retina GTGAAAACAA (4) 3.8 0.0038 P10.5 crx+ retina AGCGGAGCCA (2) 1.9 0.0019 P10.5 crx+ retina GCAGTCACAG (6) 1.9 0.0019 Adult retinal GCAGTCACAG (6) 3.7 0.0037 Adult retinal GTGAAAAAAA (22) 3.7 0.0037 Adult retinal AGCGGAGCCA (2) 1.9 0.0019 ONL GTGAAAAAAA (22) 5.7 0.0057