Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.283339 Prpf39PRP39 pre-mRNA processing factor 39 homolog (yeast) 12    328110 
 Human Homolog PRPF39[PRP39 pre-mRNA processing factor 39 homolog (yeast)]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 99 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCCAAAAAAAAA (157)47.30.0473
P8 Cb GCACACTTTTTG (3)6.50.0065
P8 Cb GCACAACATTAA (2)1.60.0016
P8 Cb GCCAGCAAAAAA (5)1.60.0016
P8 Cb GCCTCTGCCTTT1.60.0016
P8 Cb GCGTGACATTTA (2)1.60.0016
Cb medulloblastomaCAAAAAAAAA (157)92.50.0925
Cb medulloblastomaACACTTTTTG (3)9.20.0092
Cb medulloblastomaCAGCAAAAAA (5)2.30.0023
Cb medulloblastomaCCTTTCTGCG (3)2.30.0023
P8 GC+1d cultureCAAAAAAAAA (157)37.70.0377
P8 GC+1d cultureACACTTTTTG (3)80.008
P8 GC+1d cultureAGCTGCAAAA (2)1.10.0011
P8 GC+1d cultureCCTTTCTGCG (3)1.10.0011
P8 GC+SHH+1d cultureCAAAAAAAAA (157)58.50.0585
P8 GC+SHH+1d cultureACACTTTTTG (3)5.90.0059
P8 GC+SHH+1d cultureACACTTTTAT (7)1.20.0012
P8 GC+SHH+1d cultureAGCTGCAAAA (2)1.20.0012
P8 GC+SHH+1d cultureCAGCAAAAAA (5)1.20.0012
P8 GC+SHH+1d cultureTGAAATCAAA1.20.0012
E15 cortexCAAAAAAAAA (157)34.60.0346
E15 cortexACACTTTTTG (3)4.90.0049
P1 cortexCAAAAAAAAA (157)22.70.0227
P1 cortexACACTTTTTG (3)9.10.0091
HypothalamusCAAAAAAAAA (157)39.80.0398
HypothalamusAGCTGCAAAA (2)5.40.0054
HypothalamusCCTTTCTGCG (3)3.60.0036
HypothalamusACACTTTTTG (3)1.80.0018
HypothalamusCAGCAAAAAA (5)1.80.0018
HypothalamusGGGCTGGGAT (5)1.80.0018
HypothalamusTGAAATCAAA1.80.0018
E12.5 retinaCAAAAAAAAA (157)22.50.0225
E12.5 retinaACAACATTAA (2)3.80.0038
E12.5 retinaACACTTTTTG (3)3.80.0038
E12.5 retinaCAGCAAAAAA (5)3.80.0038
E12.5 retinaCCTTTCTGCG (3)3.80.0038
E12.5 retinaACACTTTTAT (7)1.90.0019
E12.5 retinaGGGCTGGGAT (5)1.90.0019
E12.5 retinaTAAAACTTAT (2)1.90.0019
E14.5 retinaCAAAAAAAAA (157)9.10.0091
E14.5 retinaACACTTTTAT (7)5.50.0055
E14.5 retinaAGCTGCAAAA (2)3.60.0036
E14.5 retinaCCTTTCTGCG (3)3.60.0036
E14.5 retinaCAGCAAAAAA (5)1.80.0018
E14.5 retinaCTCTGCCTTT1.80.0018
E14.5 retinaTACAAAATAA (7)1.80.0018
E16.5 retinaCAAAAAAAAA (157)9.10.0091
E16.5 retinaACACTTTTAT (7)3.60.0036
E16.5 retinaACACTTTTTG (3)3.60.0036
E16.5 retinaAGCTGCAAAA (2)1.80.0018
E16.5 retinaCCTTTCTGCG (3)1.80.0018
E16.5 retinaCTCTGCCTTT1.80.0018
E16.5 retinaGTGACATTTA (2)1.80.0018
E18.5 retinaCAAAAAAAAA (157)41.80.0418
E18.5 retinaCAGCAAAAAA (5)7.30.0073
E18.5 retinaACACTTTTTG (3)3.60.0036
E18.5 retinaCCTTTCTGCG (3)3.60.0036
E18.5 retinaAGCTGCAAAA (2)1.80.0018
E18.5 retinaTAAAACTTAT (2)1.80.0018
E18.5 retinaTGAAATCAAA1.80.0018
P0.5 retinaCAAAAAAAAA (157)137.40.1374
P0.5 retinaACACTTTTTG (3)3.90.0039
P0.5 retinaAGCTGCAAAA (2)20.002
P0.5 retinaCCTTTCTGCG (3)20.002
P0.5 retinaTAAAACTTAT (2)20.002
P2.5 retinaCAAAAAAAAA (157)52.80.0528
P2.5 retinaCCTTTCTGCG (3)70.007
P2.5 retinaACACTTTTTG (3)5.30.0053
P2.5 retinaCAGCAAAAAA (5)3.50.0035
P2.5 retinaTAAAACTTAT (2)3.50.0035
P2.5 retinaTACAAAATAA (7)3.50.0035
P4.5 retinaCAAAAAAAAA (157)41.60.0416
P4.5 retinaACACTTTTTG (3)5.90.0059
P4.5 retinaAGCTGCAAAA (2)20.002
P4.5 retinaTACAAAATAA (7)20.002
P6.5 retinaCAAAAAAAAA (157)31.70.0317
P6.5 retinaAGCTGCAAAA (2)50.005
P6.5 retinaCCTTTCTGCG (3)3.30.0033
P6.5 retinaCAGCAAAAAA (5)1.70.0017
P10.5 crx- retinaCAAAAAAAAA (157)130.013
P10.5 crx- retinaAGCTGCAAAA (2)9.30.0093
P10.5 crx- retinaACACTTTTTG (3)3.70.0037
P10.5 crx- retinaCCTTTCTGCG (3)3.70.0037
P10.5 crx- retinaACAACATTAA (2)1.90.0019
P10.5 crx- retinaCAGCAAAAAA (5)1.90.0019
P10.5 crx- retinaGTGACATTTA (2)1.90.0019
P10.5 crx+ retinaCAAAAAAAAA (157)32.70.0327
P10.5 crx+ retinaCCTTTCTGCG (3)11.50.0115
P10.5 crx+ retinaACACTTTTTG (3)9.60.0096
P10.5 crx+ retinaAGCTGCAAAA (2)5.80.0058
P10.5 crx+ retinaCAGCAAAAAA (5)1.90.0019
P10.5 crx+ retinaGGGCTGGGAT (5)1.90.0019
P10.5 crx+ retinaGTGACATTTA (2)1.90.0019
Adult retinalCAAAAAAAAA (157)20.40.0204
Adult retinalCCTTTCTGCG (3)7.40.0074
Adult retinalAGCTGCAAAA (2)5.60.0056
Adult retinalACACTTTTAT (7)1.90.0019
ONLCAAAAAAAAA (157)17.20.0172
ONLAGCTGCAAAA (2)5.70.0057