Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.283370	Ncald	neurocalcin delta	15	15 B3.1 (15 11.0 cM)	52589
Gene Ontology	calcium ion binding
Human Homolog	NCALD[neurocalcin delta]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 2 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 50 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CACAGACTTC 4.9 0.0049 P8 Cb GC GAACTGGAGT (4) 1.6 0.0016 P8 Cb GC TGTGACAACA 1.6 0.0016 Cb medulloblastoma TTTAGCGAGC 4.6 0.0046 Cb medulloblastoma CCCTGGGAGC 2.3 0.0023 Cb medulloblastoma GCCCTGGGGA 2.3 0.0023 P8 GC+1d culture TTTATTATTT (4) 2.3 0.0023 P8 GC+1d culture GCCCTGGGGA 1.1 0.0011 P8 GC+SHH+1d culture TTTAGCGAGC 3.5 0.0035 P8 GC+SHH+1d culture TTTATTATTT (4) 1.2 0.0012 E15 cortex CCCTGGGAGC 4.9 0.0049 E15 cortex GCCCTGGGGA 4.9 0.0049 P1 cortex CCCTGGGAGC 22.7 0.0227 P1 cortex TTTATTATTT (4) 9.1 0.0091 P1 cortex AGATTTTCCT 4.5 0.0045 Hypothalamus TTTATTATTT (4) 7.2 0.0072 Hypothalamus AGATTTTCCT 3.6 0.0036 Hypothalamus GAGAGTTCCA 3.6 0.0036 Hypothalamus CACAGACTTC 1.8 0.0018 Hypothalamus CCCTGGGAGC 1.8 0.0018 Hypothalamus TTTAGCGAGC 1.8 0.0018 E14.5 retina TTTATTATTT (4) 3.6 0.0036 E16.5 retina GAACTGGAGT (4) 1.8 0.0018 E16.5 retina TTTATTATTT (4) 1.8 0.0018 E18.5 retina GCCCTGGGGA 3.6 0.0036 E18.5 retina TTTATTATTT (4) 1.8 0.0018 P0.5 retina GAACTGGAGT (4) 2 0.002 P2.5 retina TTTATTATTT (4) 12.3 0.0123 P2.5 retina AGATTTTCCT 3.5 0.0035 P2.5 retina TTTAGCGAGC 3.5 0.0035 P2.5 retina CCCTGGGAGC 1.8 0.0018 P2.5 retina GCCCTGGGGA 1.8 0.0018 P2.5 retina TGTGACAACA 1.8 0.0018 P4.5 retina TTTATTATTT (4) 5.9 0.0059 P4.5 retina AGATTTTCCT 2 0.002 P4.5 retina TTTAGCGAGC 2 0.002 P6.5 retina TTTATTATTT (4) 3.3 0.0033 P6.5 retina CCCTGGGAGC 1.7 0.0017 P6.5 retina TTTAGCGAGC 1.7 0.0017 P10.5 crx- retina TTTAGCGAGC 1.9 0.0019 P10.5 crx+ retina GCCCTGGGGA 1.9 0.0019 P10.5 crx+ retina TTTAGCGAGC 1.9 0.0019 P10.5 crx+ retina TTTATTATTT (4) 1.9 0.0019 Adult retinal GCCCTGGGGA 5.6 0.0056 Adult retinal TTTAGCGAGC 3.7 0.0037 Adult retinal TGTGACAACA 1.9 0.0019 Adult retinal TTTATTATTT (4) 1.9 0.0019 ONL GAACTGGAGT (4) 3.8 0.0038 ONL GAGAGTTCCA 1.9 0.0019 ONL TTTATTATTT (4) 1.9 0.0019