Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.283802	H2afy	H2A histone family, member Y	13		26914
Gene Ontology	Barr body | centrosome | chromatin binding | chromosome | chromosome organization and biogenesis (sensu Eukarya) | condensed chromosome | DNA binding | dosage compensation | nucleosome | nucleosome assembly | nucleus | nucleus
Human Homolog	H2AFY[H2A histone family, member Y]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 64 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CGGTGTCCCC GCTGCTGTCC (3) GTTTTGTAAA (2) TCGAGCCGCG 32.7 0.0327 Cb medulloblastoma GCTGCTGTCC (3) GTTTTGTAAA (2) 9.2 0.0092 P8 GC+1d culture CGGTGTCCCC GTTTTGTAAA (2) 17.1 0.0171 P8 GC+SHH+1d culture CGGTGTCCCC GCCTGCACTA (2) GTTTTGTAAA (2) 18.8 0.0188 3T3 fibroblasts CGGTGTCCCC GTTTTGTAAA (2) 7 0.007 E15 cortex CGGTGTCCCC GCCTGCCTGC (2) 39.5 0.0395 P1 cortex CGGTGTCCCC GCCTGCCTGC (2) 9 0.009 Hypothalamus CGGTGTCCCC GCTGCTGTCC (3) GTTTTGTAAA (2) TGCATACATA 18.1 0.0181 E12.5 retina CGGTGTCCCC GAGTGCCGTT GTTTTGTAAA (2) 33.9 0.0339 E14.5 retina CGGTGTCCCC GCCTGCACTA (2) GTTTTGTAAA (2) TCGAGCCGCG 34.6 0.0346 E16.5 retina CGGTGTCCCC GCCTGCACTA (2) GCCTGCCTGC (2) GCTGCTGTCC (3) GTTTTGTAAA (2) 32.6 0.0326 E18.5 retina CGGTGTCCCC GCTGCTGTCC (3) GTTTTGTAAA (2) TGCATACATA 30.9 0.0309 P0.5 retina CGGTGTCCCC GCCTGCACTA (2) GTTTTGTAAA (2) TGCATACATA 17.7 0.0177 P2.5 retina CAGGTGTCCC (2) CGGTGTCCCC GCCTGCACTA (2) GCCTGCCTGC (2) GTTTTGTAAA (2) TGCATACATA 35.2 0.0352 P4.5 retina CGGTGTCCCC GTTTTGTAAA (2) TGCATACATA 31.8 0.0318 P6.5 retina CGGTGTCCCC GAGTGCCGTT GCCTGCACTA (2) GTTTTGTAAA (2) TGCATACATA 21.7 0.0217 P10.5 crx- retina GCTGCTGTCC (3) GTTTTGTAAA (2) 11.2 0.0112 P10.5 crx+ retina CGGTGTCCCC TGCATACATA 15.4 0.0154 Adult retinal CGGTGTCCCC GCCTGCCTGC (2) 11.2 0.0112 ONL CAGGTGTCCC (2) CGGTGTCCCC GTTTTGTAAA (2) 5.7 0.0057