Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28427	Lt1	lurcher transcript 1	6	6 29.71 cM	16991
Mm.28427	C77387	expressed sequence C77387	18		98107
Mm.28427	BC021395	cDNA sequence BC021395	18		225283
Human Homolog	P15RS[hypothetical protein FLJ10656]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 75 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGACTGGCAG (6) 3.3 0.0033 P8 Cb GC CACCTGGCCT (4) 1.6 0.0016 P8 Cb GC CCTTTAATTT (19) 1.6 0.0016 P8 Cb GC GAAAAGGGAA (9) 1.6 0.0016 P8 Cb GC TATTTTCTAT (5) 1.6 0.0016 Cb medulloblastoma CACCTGGCCT (4) 2.3 0.0023 Cb medulloblastoma GAAAAAGGAT (5) 2.3 0.0023 Cb medulloblastoma GAAAAGGGAA (9) 2.3 0.0023 Cb medulloblastoma TGACTGGCAG (6) 2.3 0.0023 P8 GC+1d culture TGACTGGCAG (6) 6.8 0.0068 P8 GC+1d culture CACCTGGCCT (4) 3.4 0.0034 P8 GC+1d culture GAAAAAGGAT (5) 3.4 0.0034 P8 GC+1d culture GAAAAGGGAA (9) 2.3 0.0023 P8 GC+1d culture ACTTCAGAGT (4) 1.1 0.0011 P8 GC+1d culture AGTGAGACTC (3) 1.1 0.0011 P8 GC+1d culture TATTTTCTAT (5) 1.1 0.0011 P8 GC+1d culture TGGAGGGCAC (5) 1.1 0.0011 P8 GC+SHH+1d culture CACCTGGCCT (4) 3.5 0.0035 P8 GC+SHH+1d culture TGACTGGCAG (6) 3.5 0.0035 P8 GC+SHH+1d culture AGTGAGACTC (3) 1.2 0.0012 P8 GC+SHH+1d culture TATTTTCTAT (5) 1.2 0.0012 3T3 fibroblasts CACCTGGCCT (4) 3.5 0.0035 P1 cortex GAAAAGGGAA (9) 9.1 0.0091 P1 cortex GAAAAAGGAT (5) 4.5 0.0045 Hypothalamus GAAAAAGGAT (5) 9.1 0.0091 Hypothalamus TGACTGGCAG (6) 1.8 0.0018 E12.5 retina GAAAAAGGAT (5) 3.8 0.0038 E12.5 retina AACCACCACA (12) 1.9 0.0019 E12.5 retina CACCTGGCCT (4) 1.9 0.0019 E12.5 retina GAAAAGGGAA (9) 1.9 0.0019 E14.5 retina GAAAAAGGAT (5) 1.8 0.0018 E14.5 retina GAAAAGGGAA (9) 1.8 0.0018 E14.5 retina TGACTGGCAG (6) 1.8 0.0018 E16.5 retina CACCTGGCCT (4) 5.4 0.0054 E16.5 retina GAAAAAGGAT (5) 3.6 0.0036 E16.5 retina GAAAAGGGAA (9) 1.8 0.0018 E18.5 retina AACCACCACA (12) 1.8 0.0018 E18.5 retina ACTTCAGAGT (4) 1.8 0.0018 E18.5 retina CACCTGGCCT (4) 1.8 0.0018 E18.5 retina GAAAAAGGAT (5) 1.8 0.0018 E18.5 retina TGACTGGCAG (6) 1.8 0.0018 P0.5 retina CACCTGGCCT (4) 5.9 0.0059 P0.5 retina AACCACCACA (12) 2 0.002 P0.5 retina TGACTGGCAG (6) 2 0.002 P2.5 retina CACCTGGCCT (4) 5.3 0.0053 P2.5 retina GAAAAAGGAT (5) 5.3 0.0053 P2.5 retina TGACTGGCAG (6) 5.3 0.0053 P2.5 retina AGTGAGACTC (3) 3.5 0.0035 P2.5 retina GAAAAGGGAA (9) 3.5 0.0035 P2.5 retina AACCACCACA (12) 1.8 0.0018 P2.5 retina ACTTCAGAGT (4) 1.8 0.0018 P2.5 retina TGGAGGGCAC (5) 1.8 0.0018 P4.5 retina TGACTGGCAG (6) 5.9 0.0059 P4.5 retina CACCTGGCCT (4) 2 0.002 P4.5 retina GAAAAGGGAA (9) 2 0.002 P6.5 retina GAAAAAGGAT (5) 1.7 0.0017 P6.5 retina GAAAAGGGAA (9) 1.7 0.0017 P6.5 retina TGACTGGCAG (6) 1.7 0.0017 P6.5 retina TGGAGGGCAC (5) 1.7 0.0017 P10.5 crx- retina CACCTGGCCT (4) 3.7 0.0037 P10.5 crx- retina CCTTTAATTT (19) 3.7 0.0037 P10.5 crx- retina GAAAAAGGAT (5) 3.7 0.0037 P10.5 crx- retina TGGAGGGCAC (5) 3.7 0.0037 P10.5 crx- retina GAAAAGGGAA (9) 1.9 0.0019 P10.5 crx+ retina TGGAGGGCAC (5) 5.8 0.0058 P10.5 crx+ retina AGTGAGACTC (3) 1.9 0.0019 P10.5 crx+ retina GAAAAAGGAT (5) 1.9 0.0019 P10.5 crx+ retina GAAAAGGGAA (9) 1.9 0.0019 P10.5 crx+ retina TGACTGGCAG (6) 1.9 0.0019 Adult retinal CACCTGGCCT (4) 7.4 0.0074 Adult retinal TGACTGGCAG (6) 5.6 0.0056 Adult retinal GAAAAGGGAA (9) 1.9 0.0019 ONL GAAAAGGGAA (9) 3.8 0.0038 ONL CACCTGGCCT (4) 1.9 0.0019 ONL TGGAGGGCAC (5) 1.9 0.0019