Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2845	Ubtf	upstream binding transcription factor, RNA polymerase I	11		21429
Gene Ontology	DNA binding | nucleolus | nucleus | protein binding | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex
Human Homolog	UBTF[upstream binding transcription factor, RNA polymerase I]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 53 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGCCTCCTA GACAATGGAC GTGGAGATTG (2) 19.6 0.0196 Cb medulloblastoma ACCAAGCTCC CAGCCTCCTA GTGCTATGCA (2) GTGGAGATTG (2) 16.1 0.0161 P8 GC+1d culture ACCAAGCTCC CAGCCTCCTA GACAATGGAC GTGCTATGCA (2) GTGGAGATTG (2) 35.4 0.0354 P8 GC+SHH+1d culture CAGCCTCCTA GACAATGGAC GTGGAGATTG (2) 22.3 0.0223 3T3 fibroblasts GACAATGGAC 7 0.007 E15 cortex GTGCTATGCA (2) GTGGAGATTG (2) 34.6 0.0346 P1 cortex GACAATGGAC GTGGAGATTG (2) 9 0.009 Hypothalamus GACAATGGAC GTGGAGATTG (2) 3.6 0.0036 E12.5 retina CAGCCTCCTA GACAATGGAC GTGGAGATTG (2) 18.9 0.0189 E14.5 retina CAGCCTCCTA GCTATCCAGG GTGGAGATTG (2) 16.3 0.0163 E16.5 retina GACAATGGAC GTGGAGATTG (2) 19.9 0.0199 E18.5 retina CAGCCTCCTA GTGGAGATTG (2) 10.9 0.0109 P0.5 retina GACAATGGAC GCTATCCAGG GTGGAGATTG (2) 19.7 0.0197 P2.5 retina CAGCCTCCTA GACAATGGAC GTGGAGATTG (2) 19.3 0.0193 P4.5 retina CAGCCTCCTA GTGGAGATTG (2) 13.9 0.0139 P6.5 retina CAGCCTCCTA GACAATGGAC GCTATCCAGG GTGCTATGCA (2) GTGGAGATTG (2) 21.7 0.0217 P10.5 crx- retina GACAATGGAC GTGGAGATTG (2) 13 0.013 P10.5 crx+ retina CAGCCTCCTA GACAATGGAC GTGGAGATTG (2) 19.2 0.0192 Adult retinal GACAATGGAC GTGGAGATTG (2) 11.2 0.0112 ONL CAGCCTCCTA 1.9 0.0019