Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.284853	Gnat1	guanine nucleotide binding protein, alpha transducing 1	9	9 F2 (9 59.0 cM)	14685
Gene Ontology	G-protein coupled receptor protein signaling pathway | G-protein signaling, coupled to cGMP nucleotide second messenger | GTP binding | GTPase activity | GTPase activity | heterotrimeric G-protein complex | heterotrimeric G-protein complex | membrane fraction | phototransduction | signal transducer activity | signal transduction | vision
Human Homolog	GNAT1[guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 14 In Situ Hybridization Images

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SAGE Tags

Total 45 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  Cb medulloblastoma GTGCTGGTGG (2) 2.3 0.0023 P8 GC+1d culture GTGCCTGGGG (2) GTGCTGGTGG (2) GTGGCTGGGT GTGTCTTTTC 5.6 0.0056 P8 GC+SHH+1d culture GTGCCTGGGG (2) GTGCTGGGTG (3) GTGCTGGTTG 3.6 0.0036 3T3 fibroblasts GTGCTGGGTG (3) 3.5 0.0035 E15 cortex GTGCCTGGGG (2) GTGGCTGGGT 19.7 0.0197 P1 cortex GTGCTGGTTG 4.5 0.0045 Hypothalamus GTGCTGGTGG (2) TTGTCCCTCC 3.6 0.0036 E14.5 retina GTGCCTGGGG (2) GTGTCTTTTC 3.6 0.0036 E16.5 retina GTGCCTGGGG (2) 1.8 0.0018 E18.5 retina GTGCCTGGGG (2) GTGTCTTTTC 5.4 0.0054 P0.5 retina GTGGCTGGGT 2 0.002 P2.5 retina GTGGCTGGGT 1.8 0.0018 P4.5 retina GTGCCTGGGG (2) 2 0.002 P6.5 retina GTGCCTGGGG (2) 1.7 0.0017 P10.5 crx- retina GTGCCTGGGG (2) GTGCTGGGTG (3) GTGCTGGTGG (2) GTGGCTGGGT 9.4 0.0094 P10.5 crx+ retina AGGCTTGCAG GTGCTGGTGG (2) GTGCTGGTTG GTGGCTGGGT TTGTCCCTCC 55.6 0.0556 Adult retinal ACGTGCGCTA AGGCTTGCAG GCAGATACTA GTGCTGGTGG (2) GTGGCTGGGT TTGTCCCTCC 455.5 0.4555 ONL ACGTGCGCTA AGGCTTGCAG GCAGATACTA GTGCTGGTGG (2) GTGGCTGGGT GTGTCTTTTC TTGTCCCTCC 377.2 0.3772