Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.284944
Hsd17b13
hydroxysteroid (17-beta) dehydrogenase 13
5
243168
Human Homolog
SCDR9[short-chain dehydrogenase/reductase 9]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 34 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTCCCACCTT
(
15
)
3.3
0.0033
P8 Cb GC
TGTGTGTGCT (
8
)
1.6
0.0016
P8 Cb GC
TTTAAAATGT (
5
)
1.6
0.0016
Cb medulloblastoma
CTCCCACCTT
(
15
)
13.9
0.0139
P8 GC+1d culture
CTCCCACCTT
(
15
)
9.1
0.0091
P8 GC+1d culture
TTTAAAATGT (
5
)
3.4
0.0034
P8 GC+SHH+1d culture
CTCCCACCTT
(
15
)
8.2
0.0082
P8 GC+SHH+1d culture
TTTAAAATGT (
5
)
1.2
0.0012
3T3 fibroblasts
CTCCCACCTT
(
15
)
10.5
0.0105
E15 cortex
CTCCCACCTT
(
15
)
9.9
0.0099
P1 cortex
TTTAAAATGT (
5
)
4.5
0.0045
Hypothalamus
CTCCCACCTT
(
15
)
9.1
0.0091
E12.5 retina
CTCCCACCTT
(
15
)
9.4
0.0094
E14.5 retina
CTCCCACCTT
(
15
)
12.8
0.0128
E14.5 retina
TTTAAAATGT (
5
)
3.6
0.0036
E16.5 retina
CTCCCACCTT
(
15
)
9.1
0.0091
E16.5 retina
TGTGTGTGCT (
8
)
1.8
0.0018
E16.5 retina
TTTAAAATGT (
5
)
1.8
0.0018
E18.5 retina
CTCCCACCTT
(
15
)
14.6
0.0146
P0.5 retina
CTCCCACCTT
(
15
)
11.8
0.0118
P2.5 retina
CTCCCACCTT
(
15
)
15.8
0.0158
P2.5 retina
TTTAAAATGT (
5
)
1.8
0.0018
P4.5 retina
CTCCCACCTT
(
15
)
37.6
0.0376
P4.5 retina
TTTAAAATGT (
5
)
2
0.002
P6.5 retina
CTCCCACCTT
(
15
)
20
0.02
P6.5 retina
TGTGTGTGCT (
8
)
1.7
0.0017
P10.5 crx- retina
CTCCCACCTT
(
15
)
13
0.013
P10.5 crx- retina
TTTAAAATGT (
5
)
1.9
0.0019
P10.5 crx+ retina
CTCCCACCTT
(
15
)
21.1
0.0211
P10.5 crx+ retina
TTTAAAATGT (
5
)
1.9
0.0019
Adult retinal
CTCCCACCTT
(
15
)
35.2
0.0352
Adult retinal
TTTAAAATGT (
5
)
3.7
0.0037
ONL
CTCCCACCTT
(
15
)
15.3
0.0153
ONL
TGTGTGTGCT (
8
)
1.9
0.0019
