Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.285	Kdr	kinase insert domain protein receptor	5	5 42.0 cM	16542
Gene Ontology	angiogenesis | ATP binding | cell fate commitment | endothelial cell differentiation | extracellular space | integral to membrane | kinase activity | membrane | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | receptor activity | transferase activity | transmembrane receptor protein tyrosine kinase activity | transmembrane receptor protein tyrosine kinase signaling pathway | vascular endothelial growth factor receptor activity
Human Homolog	KDR[kinase insert domain receptor (a type III receptor tyrosine kinase)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCAGTACCTG (3) 3.3 0.0033 P8 Cb GC TGCTGCTCTG (3) 3.3 0.0033 P8 Cb GC TATAAAAATG (2) 1.6 0.0016 Cb medulloblastoma CCAGTACCTG (3) 4.6 0.0046 Cb medulloblastoma TATAAAAATG (2) 4.6 0.0046 Cb medulloblastoma TGCTGCTCTG (3) 2.3 0.0023 P8 GC+1d culture CCAGTACCTG (3) 14.8 0.0148 P8 GC+1d culture GAATATGCAG (4) 2.3 0.0023 P8 GC+1d culture GTGAGGAAGG (9) 2.3 0.0023 P8 GC+1d culture TGCTGCTCTG (3) 2.3 0.0023 P8 GC+1d culture TATAAAAATG (2) 1.1 0.0011 P8 GC+SHH+1d culture CCAGTACCTG (3) 7 0.007 P8 GC+SHH+1d culture TGCTGCTCTG (3) 2.3 0.0023 P8 GC+SHH+1d culture TATAAAAATG (2) 1.2 0.0012 E15 cortex CCAGTACCTG (3) 9.9 0.0099 E15 cortex GTGAGGAAGG (9) 4.9 0.0049 P1 cortex CCAGTACCTG (3) 9.1 0.0091 P1 cortex TATAAAAATG (2) 9.1 0.0091 Hypothalamus CCAGTACCTG (3) 1.8 0.0018 E12.5 retina GAATATGCAG (4) 7.5 0.0075 E12.5 retina CCAGTACCTG (3) 3.8 0.0038 E14.5 retina TATAAAAATG (2) 7.3 0.0073 E14.5 retina AAATTGAGCT (2) 3.6 0.0036 E14.5 retina CCAGTACCTG (3) 1.8 0.0018 E14.5 retina GAATATGCAG (4) 1.8 0.0018 E16.5 retina TATAAAAATG (2) 5.4 0.0054 E16.5 retina AAATTGAGCT (2) 3.6 0.0036 E16.5 retina CCAGTACCTG (3) 3.6 0.0036 E16.5 retina GAATATGCAG (4) 3.6 0.0036 E18.5 retina TATAAAAATG (2) 10.9 0.0109 E18.5 retina GAATATGCAG (4) 1.8 0.0018 P0.5 retina GAATATGCAG (4) 9.8 0.0098 P0.5 retina TATAAAAATG (2) 5.9 0.0059 P0.5 retina CCAGTACCTG (3) 2 0.002 P0.5 retina GTGAGGAAGG (9) 2 0.002 P2.5 retina GAATATGCAG (4) 8.8 0.0088 P2.5 retina TATAAAAATG (2) 5.3 0.0053 P2.5 retina CCAGTACCTG (3) 1.8 0.0018 P2.5 retina TGCTGCTCTG (3) 1.8 0.0018 P4.5 retina GAATATGCAG (4) 7.9 0.0079 P4.5 retina TATAAAAATG (2) 7.9 0.0079 P4.5 retina CCAGTACCTG (3) 2 0.002 P6.5 retina GAATATGCAG (4) 8.3 0.0083 P6.5 retina AAATTGAGCT (2) 1.7 0.0017 P6.5 retina TATAAAAATG (2) 1.7 0.0017 P10.5 crx- retina TATAAAAATG (2) 9.3 0.0093 P10.5 crx- retina GAATATGCAG (4) 1.9 0.0019 P10.5 crx- retina TGCTGCTCTG (3) 1.9 0.0019 Adult retinal GAATATGCAG (4) 5.6 0.0056 Adult retinal TGCTGCTCTG (3) 5.6 0.0056 ONL TATAAAAATG (2) 1.9 0.0019 ONL TGCTGCTCTG (3) 1.9 0.0019