Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28520	AA408705	expressed sequence AA408705	4	4 83.0 cM	99977
Mm.28520	Ski	Sloan-Kettering viral oncogene homolog	4	4 78.9 cM	20481
Gene Ontology	cell growth and/or maintenance | cytoplasm | limb morphogenesis | nucleus | protein binding | transcriptional repressor complex
Human Homolog	SKI[v-ski sarcoma viral oncogene homolog (avian)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 75 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC CATACAAGTT (2) 1.6 0.0016 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma GGCATTATGA (2) 4.6 0.0046 Cb medulloblastoma CATACAAGTT (2) 2.3 0.0023 Cb medulloblastoma TGCTACACAC (2) 2.3 0.0023 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture GGCATTATGA (2) 5.7 0.0057 P8 GC+1d culture TGCTACACAC (2) 2.3 0.0023 P8 GC+1d culture ATAGCAGGTC (4) 1.1 0.0011 P8 GC+1d culture CTCATCAATT (3) 1.1 0.0011 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture TGCTACACAC (2) 5.9 0.0059 P8 GC+SHH+1d culture CTCATCAATT (3) 2.3 0.0023 P8 GC+SHH+1d culture GGCATTATGA (2) 1.2 0.0012 P8 GC+SHH+1d culture GGGCTGGTAG (3) 1.2 0.0012 3T3 fibroblasts TGCTACACAC (2) 10.5 0.0105 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 3T3 fibroblasts GGCATTATGA (2) 3.5 0.0035 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 E15 cortex TGCTACACAC (2) 4.9 0.0049 P1 cortex TAAAAAAAAA (196) 50 0.05 P1 cortex CTCATCAATT (3) 4.5 0.0045 P1 cortex GGCATTATGA (2) 4.5 0.0045 P1 cortex TGCTACACAC (2) 4.5 0.0045 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus TGGCCTGCTC (5) 5.4 0.0054 Hypothalamus GGCATTATGA (2) 1.8 0.0018 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E12.5 retina GGCATTATGA (2) 5.6 0.0056 E12.5 retina CTCATCAATT (3) 3.8 0.0038 E12.5 retina TGCTACACAC (2) 1.9 0.0019 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina CATACAAGTT (2) 1.8 0.0018 E14.5 retina GGCATTATGA (2) 1.8 0.0018 E14.5 retina TGCTACACAC (2) 1.8 0.0018 E14.5 retina TTTTTTAATG (2) 1.8 0.0018 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E16.5 retina TGCTACACAC (2) 5.4 0.0054 E16.5 retina GGCATTATGA (2) 3.6 0.0036 E16.5 retina TGGCCTGCTC (5) 3.6 0.0036 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina GGCATCCTGC (3) 1.8 0.0018 E18.5 retina TGCTACACAC (2) 1.8 0.0018 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P0.5 retina GGCATTATGA (2) 5.9 0.0059 P0.5 retina TGCTACACAC (2) 3.9 0.0039 P0.5 retina CTCATCAATT (3) 2 0.002 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina GGCATCCTGC (3) 3.5 0.0035 P2.5 retina GGCATTATGA (2) 3.5 0.0035 P2.5 retina GGGCTGGTAG (3) 3.5 0.0035 P2.5 retina TGCTACACAC (2) 1.8 0.0018 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina TGCTACACAC (2) 5.9 0.0059 P4.5 retina CTCATCAATT (3) 2 0.002 P4.5 retina GGCATCCTGC (3) 2 0.002 P4.5 retina GGCATTATGA (2) 2 0.002 P4.5 retina TTTTTTAATG (2) 2 0.002 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina GGCATTATGA (2) 5 0.005 P6.5 retina TGCTACACAC (2) 5 0.005 P6.5 retina CTCATCAATT (3) 1.7 0.0017 P6.5 retina GGGCTGGTAG (3) 1.7 0.0017 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina TGGCCTGCTC (5) 3.7 0.0037 P10.5 crx- retina TTTTTTAATG (2) 1.9 0.0019 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina TGCTACACAC (2) 3.8 0.0038 P10.5 crx+ retina ATAGCAGGTC (4) 1.9 0.0019 P10.5 crx+ retina CATACAAGTT (2) 1.9 0.0019 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal TGCTACACAC (2) 1.9 0.0019 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL CTCATCAATT (3) 1.9 0.0019