Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.285322	Mtch1	mitochondrial carrier homolog 1 (C. elegans)	17		56462
Gene Ontology	binding | integral to membrane | mitochondrial inner membrane | transport
Human Homolog	MTCH1[mitochondrial carrier homolog 1 (C. elegans)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 83 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTTTGCCCTG GACTCCAGGC (2) GCCCAGGTGT (3) GTGCAGTTTG (2) TGTCTGTCCA TTCTCCTCAG 19.5 0.0195 Cb medulloblastoma CTTTGCCCTG TGTCTGTCCA TTCTCCTCAG 9.2 0.0092 P8 GC+1d culture AAGACCTCAT (3) CTTTGCCCTG GCCCAGGCTG (2) GTGCAGTCTG GTGCAGTTTG (2) TGTCTGGTCA (2) TTCTCCTCAG 43.1 0.0431 P8 GC+SHH+1d culture CTTTGCCCTG GCCCAGGCTG (2) GCCCAGGTGT (3) GTGCAGTTTG (2) TTCTCCTCAG 24.6 0.0246 3T3 fibroblasts GCCCAGGTGT (3) TGTCTGGTCA (2) TTCTCCTCAG TTGGGGTGGG 17.5 0.0175 E15 cortex GCCCAGGCTG (2) TTCTCCTCAG 19.7 0.0197 P1 cortex TTCTCCTCAG TTGGGGTGGG 13.6 0.0136 Hypothalamus GCCCAGGTGT (3) GGAGGCTGGA (2) GTGCAGTTTG (2) TGTCTGTCCA TTCTCCTCAA TTCTCCTCAG 25.3 0.0253 E12.5 retina GCCCAGGCTG (2) TTCTCCTCAG 15 0.015 E14.5 retina TGTCTGTCCA TTCTCCTCAG TTGGGGTGGG 14.6 0.0146 E16.5 retina GACTCCAGGC (2) GCCCAGGCTG (2) GCCCAGGTGT (3) TTCTCCTCAA TTCTCCTCAG 10.8 0.0108 E18.5 retina AACACCTCAC GCCCAGGTGT (3) TTCTCCTCAG 10.9 0.0109 P0.5 retina CTTTGCCCTG GACTCCAGGC (2) GGAGGCTGGA (2) GTGCAGTCTG TTCTCCTCAA TTCTCCTCAG 21.8 0.0218 P2.5 retina AACACCTCAC GCCCAGGTGT (3) GTGCAGTTTG (2) TTCTCCTCAG TTGGGGTGGG 21.2 0.0212 P4.5 retina GCCCAGGTGT (3) TTCTCCTCAG 8 0.008 P6.5 retina AACACCTCAC CTTTGCCCTG GCCCAGGCTG (2) GCCCAGGTGT (3) GTGCAGTCTG GTGCAGTTTG (2) TTCTCCTCAG 23.3 0.0233 P10.5 crx- retina AAGACCTCAT (3) CTTTGCCCTG GTGCAGTCTG GTGCAGTTTG (2) TTCTCCTCAG 18.7 0.0187 P10.5 crx+ retina AAGACCTCAT (3) CTTTGCCCTG GCCCAGGTGT (3) TTCTCCTCAG 17.3 0.0173 Adult retinal TGTCTGGTCA (2) TTCTCCTCAG 13 0.013 ONL AAGACCTCAT (3) GCCCAGGCTG (2) GGAGGCTGGA (2) TTCTCCTCAG 7.6 0.0076