| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATTCCCCTCC (2) TAAATCTACA (2)
| 3.2 | 0.0032 |
| P8 GC+1d culture | ATTCCCCTCC (2)
| 10.3 | 0.0103 |
| P8 GC+SHH+1d culture | ATTCCCCTCC (2) TAAATCTACA (2)
| 7.1 | 0.0071 |
| E15 cortex | ATTCCCCTCC (2)
| 9.9 | 0.0099 |
| P1 cortex | ATTCCCCTCC (2)
| 9.1 | 0.0091 |
| Hypothalamus | ATTCCCCTCC (2) TAAATCTACA (2)
| 5.4 | 0.0054 |
| E12.5 retina | ATTCCCCTCC (2)
| 5.6 | 0.0056 |
| E14.5 retina | ATTCCCCTCC (2) TAAATCTACA (2)
| 7.2 | 0.0072 |
| E16.5 retina | ATTCCCCTCC (2) GAGTCGGAGC (3)
| 7.2 | 0.0072 |
| E18.5 retina | ATTCCCCTCC (2) GGAATTAAAT (2)
| 9.1 | 0.0091 |
| P0.5 retina | ATTCCCCTCC (2)
| 5.9 | 0.0059 |
| P2.5 retina | ATTCCCCTCC (2) TAAATCTACA (2)
| 5.3 | 0.0053 |
| P4.5 retina | ATTCCCCTCC (2)
| 4 | 0.004 |
| P6.5 retina | ATTCCCCTCC (2)
| 6.7 | 0.0067 |
| P10.5 crx- retina | ATTCCCCTCC (2) GGAATTAAAT (2)
| 13 | 0.013 |
| P10.5 crx+ retina | ATTCCCCTCC (2)
| 5.8 | 0.0058 |
| Adult retinal | ATTCCCCTCC (2)
| 5.6 | 0.0056 |
| ONL | ATTCCCCTCC (2) GAGTCGGAGC (3) GGAATTAAAT (2)
| 5.7 | 0.0057 |