Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2854	Tff1	trefoil factor 1	17	17 17.0 cM	21784
Gene Ontology	cell differentiation | cytoplasm | growth factor activity | negative regulation of cell proliferation | protein binding | response to wounding
Human Homolog	TFF1[trefoil factor 1 (breast cancer, estrogen-inducible sequence expressed in)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 25 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCTATGGAGA (2) 1.6 0.0016 Cb medulloblastoma AGAGAATTGG (3) 2.3 0.0023 P8 GC+1d culture GCTATGGAGA (2) 5.7 0.0057 P8 GC+SHH+1d culture AGAGAATTGG (3) GAGAACACTC (3) GCTATGGAGA (2) 12.9 0.0129 E15 cortex GCTATGGAGA (2) 4.9 0.0049 P1 cortex AGAGAATTGG (3) 4.5 0.0045 Hypothalamus GAGAACACTC (3) GCTATGGAGA (2) 3.6 0.0036 E12.5 retina GCTATGGAGA (2) 7.5 0.0075 E14.5 retina GAGAACACTC (3) GCTATGGAGA (2) 21.8 0.0218 E16.5 retina GCTATGGAGA (2) 5.4 0.0054 E18.5 retina GCTATGGAGA (2) 18.2 0.0182 P0.5 retina GCTATGGAGA (2) 13.7 0.0137 P2.5 retina GCTATGGAGA (2) 17.6 0.0176 P4.5 retina AGAGAATTGG (3) GCTATGGAGA (2) 21.8 0.0218 P6.5 retina GCTATGGAGA (2) 10 0.01 P10.5 crx- retina GCTATGGAGA (2) 5.6 0.0056 P10.5 crx+ retina AGAGAATTGG (3) GCTATGGAGA (2) 5.7 0.0057 Adult retinal AGAGAATTGG (3) GCTATGGAGA (2) 7.5 0.0075