Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.285453	Llglh	lethal giant larvae homolog	11	11 34.0 cM	16897
Gene Ontology	cytoplasm | maintenance of apical/basal cell polarity
Human Homolog	LLGL1[lethal giant larvae homolog 1 (Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 72 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACTGAAGTCA (2) TGTGCAGATG (2) 11.5 0.0115 Cb medulloblastoma ACGCCCAGCA (2) CAGCTTGCAT (2) TAGACTTTTT (2) TGTGCAGATG (2) 11.5 0.0115 P8 GC+1d culture ACTGAAGTCA (2) TGTGCAGATG (2) 14.9 0.0149 P8 GC+SHH+1d culture ACGCCCAGCA (2) ACTGAAGTCA (2) CTGGGGCTCT CTTTGGCTTT TAGACTTTTT (2) TGTGCAGATG (2) 13 0.013 3T3 fibroblasts CAAGGCTGTC TGTGCAGATG (2) 7 0.007 E15 cortex ACTGAAGTCA (2) TAGACTTTTT (2) 9.8 0.0098 P1 cortex CTTTGGCTTT TGTGCAGATG (2) 13.6 0.0136 Hypothalamus ACGCCCAGCA (2) ACGCCCCAGC ACTGAAGTCA (2) TAGACTTTTT (2) TGTGCAGATG (2) 19.8 0.0198 E12.5 retina ACTGAAGTCA (2) CAAGGCTGTC CTGGGGCTCT TGTGCAGATG (2) 30.1 0.0301 E14.5 retina ACTGAAGTCA (2) CCTGCCTGCG CTGGGGCTCT TAGACTTTTT (2) TGTGCAGATG (2) 29.1 0.0291 E16.5 retina ACGCCCCAGC ACTGAAGTCA (2) CAGCTTGCAT (2) CCTGCCTGCG CTTTGGCTTT TAGACTTTTT (2) TGTGCAGATG (2) 41.6 0.0416 E18.5 retina ACGCCCCAGC ACTGAAGTCA (2) TAGACTTTTT (2) TGTGCAGATG (2) 25.4 0.0254 P0.5 retina ACTGAAGTCA (2) CAAGGCTGTC CCTGCCTGCG TGTGCAGATG (2) 15.8 0.0158 P2.5 retina ACTGAAGTCA (2) CAAGGCTGTC CTTTGGCTTT TGTGCAGATG (2) 14.2 0.0142 P4.5 retina ACTGAAGTCA (2) CTTTGGCTTT TGTGCAGATG (2) 27.8 0.0278 P6.5 retina ACTGAAGTCA (2) CAGCTTGCAT (2) CTTTGGCTTT TAGACTTTTT (2) TGTGCAGATG (2) 11.7 0.0117 P10.5 crx- retina ACTGAAGTCA (2) TAGACTTTTT (2) TGTGCAGATG (2) 7.5 0.0075 P10.5 crx+ retina ACTGAAGTCA (2) TAGACTTTTT (2) TGTGCAGATG (2) 19.2 0.0192 Adult retinal ACGCCCCAGC ACTGAAGTCA (2) TGTGCAGATG (2) 18.6 0.0186 ONL ACGCCCCAGC TGTGCAGATG (2) 7.6 0.0076