Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.285993	Calm1	calmodulin 1	12	7 4.5 cM	12313
Gene Ontology	calcium ion binding | cell cycle | cytoplasm | G-protein coupled receptor protein signaling pathway | plasma membrane | protein binding
Human Homolog	CALM1[calmodulin 1 (phosphorylase kinase, delta)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 297 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (2) ACAAAACTTT (2) ACAAACTTAG (3) ACAGACTTAG ACGTGGCGCA ACTCGGAGCC AGAAACTGGC AGAACAGAAC (2) ATTCCGAATT (2) CAGACTTTGT (5) CAGCTTGATG CGGCCACTGG (3) CGGTCACTGG GGATTTGGCC (3) GGTGAACTGG TCTAAATAAA (2) 340.7 0.3407 Cb medulloblastoma AAAAAAAAAA (2) ACAAACTTAA ACAAACTTAG (3) ACGTGGCGCA ACTCGGAGCC AGAACAGAAC (2) ATTTAGTGTG CACTTATAAA CAGACTTTGT (5) CAGCTTGATG CGGCCACTGG (3) CGGTCACTGG CTGTTCAAGA CTTGTAAAAA GGACTGGGGC (6) GGGAAGGGGC (2) GGTGAACTGG GTGACAGTGA (3) GTGCGAGCGA TCCAACTTGT TCTAAATAAA (2) 973.199999999999 0.9732 P8 GC+1d culture AAAAAAAAAA (2) ACAAACTTAA ACAAACTTAG (3) ACGGTCCCCA ACTCGGAGCC CAGACTTTGT (5) CGGCCACTGG (3) CGGTCACTGG CTGTTCAAGA GGACTGGGGC (6) GGATTTGGCC (3) GGGACTGGGG GGTGAACTGG GTTCACTAGG TATTGGTCGG TCCAACTTGT TCTAAATAAA (2) 380.9 0.3809 P8 GC+SHH+1d culture AAAAAAAAAA (2) ACAAACTTAG (3) ACTCGGAGCC CACTTATAAA CAGACTTTGT (5) CAGCTTGATG CGGCCACTGG (3) CTGTTCAAGA GGACTGGGGC (6) GGATTTGGCC (3) GGGAAGGGGC (2) GTGACAGTGA (3) TATTGGTCGG TCCAACTTGT TCTAAATAAA (2) 405.2 0.4052 3T3 fibroblasts AAAAAAAAAA (2) ACAAACTTAG (3) ACTCGGAGCC AGAAACTGGC CAGACTTTGT (5) CAGCTTGATG CGGCCACTGG (3) GGATTTGGCC (3) GGGAAGGGGC (2) GGTGAACTGG GTGACAGTGA (3) GTTCACCTAG TGCACACAAC (2) 164.6 0.1646 E15 cortex AAAAAAAAAA (2) ACAAACTTAG (3) ACTCGGAGCC CAGACTTTGT (5) CGGCCACTGG (3) GGTGAACTGG 356.2 0.3562 P1 cortex AAAAAAAAAA (2) ACAAACTTAG (3) ACGTGGCGCA ACTCGGAGCC CAGACTTTGT (5) CGGCCACTGG (3) GGGAAGGGGC (2) GGTGAACTGG TCTAAATAAA (2) 336.1 0.3361 Hypothalamus AAAAAAAAAA (2) ACAAAACTTT (2) ACAAACTTAG (3) ACGGTCCCCA ACGTGGCGCA ACTCGGAGCC AGAACAGAAC (2) ATTTAGTGTG CACTTATAAA CAGACTTTGT (5) CAGCTTGATG CGGCCACTGG (3) CGGTCACTGG GGTGAACTGG GTGACAGTGA (3) GTGCGAGCGA GTTCACTAGG TATTGGTCGG TCCAACTTGT TCTAAATAAA (2) 315.1 0.3151 E12.5 retina AAAAAAAAAA (2) ACAAAACTTT (2) ACAAACTTAG (3) ACTCGGAGCC CAGACTTTGT (5) CGGCCACTGG (3) CGGTCACTGG GGATTTGGCC (3) GGTGAACTGG GTTCACCTAG GTTCACTAGG TCCAACTTGT TCTAAATAAA (2) TGTGCCAAAG 236.8 0.2368 E14.5 retina AAAAAAAAAA (2) ACAAACTTAG (3) ACGGTCCCCA ACGTGGCGCA ACTCGGAGCC CAGACTTTGT (5) CAGCTTGATG CGGCCACTGG (3) CTGTTCAAGA GGATTTGGCC (3) GGTGAACTGG GTGACAGTGA (3) GTGCGAGCGA GTTCACTAGG TATTGGTCGG TCTAAATAAA (2) 231.3 0.2313 E16.5 retina AAAAAAAAAA (2) ACAAAACTTT (2) ACAAACTTAG (3) ACGGTCCCCA ACGTGGCGCA ACTCGGAGCC AGAAACTGGC CAGACTTTGT (5) CAGCTTGATG CGGCCACTGG (3) CGGTCACTGG GGACTGGGGC (6) GGATTTGGCC (3) GTGACAGTGA (3) GTGCGAGCGA TATTGGTCGG TCTAAATAAA (2) 195.6 0.1956 E18.5 retina AAAAAAAAAA (2) ACAAACTTAG (3) ACGTGGCGCA ACTCGGAGCC CAGACTTTGT (5) CAGCTTGATG CGGCCACTGG (3) CGGTCACTGG GGACTGGGGC (6) GGATTTGGCC (3) GGTGAACTGG TATTGGTCGG TCCAACTTGT TCTAAATAAA (2) TGCACACAAC (2) 471.2 0.4712 P0.5 retina AAAAAAAAAA (2) ACAAAACTTT (2) ACAAACTTAG (3) ACGGTCCCCA ACTCGGAGCC CAGACTTTGT (5) CAGCTTGATG CGGCCACTGG (3) GGACTGGGGC (6) GGATTTGGCC (3) GGGAAGGGGC (2) GGTGAACTGG TCTAAATAAA (2) TGCACACAAC (2) TGTGCCAAAG 186.7 0.1867 P2.5 retina AAAAAAAAAA (2) ACAAAACTTT (2) ACAAACTTAG (3) ACGTGGCGCA ACTCGGAGCC CAGACTTTGT (5) CAGCTTGATG CGGCCACTGG (3) GGGAAGGGGC (2) GGTGAACTGG GTGACAGTGA (3) GTGCGAGCGA GTTCACCTAG TCTAAATAAA (2) 422.5 0.4225 P4.5 retina AAAAAAAAAA (2) ACAAACTTAG (3) ACGGTCCCCA ACGTGGCGCA ACTCGGAGCC ATTCCGAATT (2) CAGACTTTGT (5) CAGCTTGATG CGGCCACTGG (3) CTTGTAAAAA GGACTGGGGC (6) GGTGAACTGG TCTAAATAAA (2) 366.7 0.3667 P6.5 retina AAAAAAAAAA (2) ACAAACTTAA ACAAACTTAG (3) ACGTGGCGCA ACTCGGAGCC ATTCCGAATT (2) CACTTATAAA CAGACTTTGT (5) CAGCTTGATG CGGCCACTGG (3) CGGTCACTGG CTGTTCAAGA GGATTTGGCC (3) GGTGAACTGG GTTCACTAGG TCTAAATAAA (2) 355.2 0.3552 P10.5 crx- retina AAAAAAAAAA (2) ACAAACTTAG (3) ACAGACTTAG ACGGTCCCCA ACGTGGCGCA ACTCGGAGCC CACTTATAAA CAGACTTTGT (5) CAGCTTGATG CGGCCACTGG (3) CGGTCACTGG GGACTGGGGC (6) GGATTTGGCC (3) GGTGAACTGG GTTCACTAGG TATTGGTCGG TCCAACTTGT TCTAAATAAA (2) TGTGCCAAAG 357 0.357 P10.5 crx+ retina AAAAAAAAAA (2) ACAAACTTAG (3) ACAGACTTAG ACGGTCCCCA ACGTGGCGCA ACTCGGAGCC AGAACAGAAC (2) CACTTATAAA CAGACTTTGT (5) CAGCTTGATG CGGCCACTGG (3) CGGTCACTGG GGTGAACTGG GTGCGAGCGA TCCAACTTGT TCTAAATAAA (2) TGCACACAAC (2) 290 0.29 Adult retinal AAAAAAAAAA (2) ACAAACTTAG (3) ACGGTCCCCA ACGTGGCGCA ACTCGGAGCC CAGACTTTGT (5) CAGCTTGATG CGGCCACTGG (3) CTGTTCAAGA GGGACTGGGG GGTGAACTGG TCCAACTTGT 168.8 0.1688 ONL AAAAAAAAAA (2) ACAAACTTAG (3) ACTCGGAGCC ATTCCGAATT (2) CACTTATAAA CAGACTTTGT (5) CAGCTTGATG CGGCCACTGG (3) GGATTTGGCC (3) GGGACTGGGG GGTGAACTGG TCTAAATAAA (2) 172.2 0.1722