Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28643	Vamp2	vesicle-associated membrane protein 2	11		22318
Gene Ontology	calcium ion dependent exocytosis | calmodulin binding | integral to membrane | phospholipid binding | regulation of exocytosis | secretory granule | SNARE binding | synapse | synaptic vesicle | synaptic vesicle exocytosis | synaptic vesicle membrane | synaptosome | zymogen granule membrane
Human Homolog	VAMP2[vesicle-associated membrane protein 2 (synaptobrevin 2)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 82 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCCCAATTC TTCAAGAAGT (2) 13 0.013 Cb medulloblastoma CCCCCAATTC GGGCAGGGGA (2) TGGGGCACTC TTCAAGAAGT (2) TTGATTAGCA 50.8 0.0508 P8 GC+1d culture AGCGCACACC CCCCCAATTC GGGCAGGGGA (2) TGGGGCACTC TTCTGTGTAT TTGATTAGCA TTTGTGAAAA (2) 27.3 0.0273 P8 GC+SHH+1d culture AGCGCACACC CCCCCAATTC TGGGGCACTC TTCAAGAAGT (2) TTCTGTGTAT TTGATTAGCA TTTGTGAAAA (2) 23.4 0.0234 E15 cortex CCCCCAATTC TTTGTGAAAA (2) 19.7 0.0197 P1 cortex CCCCCAATTC CCCCCAATTT TTTGTGAAAA (2) 27.2 0.0272 Hypothalamus CCCCCAATTC CCCCCAATTT GGGCAGGGGA (2) TGGGGCACTC TTCTGTGTAT TTGATTAGCA TTGGAAGCTC 72.4 0.0724 E12.5 retina CCCCCAATTC TTTGTGAAAA (2) 7.5 0.0075 E14.5 retina CCCCCAATTC GGGCAGGGGA (2) TTTGTGAAAA (2) 10.9 0.0109 E16.5 retina CCCCCAATTC GGGCAGGGGA (2) 19.9 0.0199 E18.5 retina CCCCCAATTC GGGCAGGGGA (2) TTTGTGAAAA (2) 21.8 0.0218 P0.5 retina CCCCCAATTC CCCCCAATTT TTGATTAGCA 13.8 0.0138 P2.5 retina CCCCCAATTC CCCCCAATTT GGGCAGGGGA (2) TTCAAGAAGT (2) TTGATTAGCA 44.1 0.0441 P4.5 retina AGCGCACACC CCCCCAATTC GGGCAGGGGA (2) TTCAAGAAGT (2) TTGATTAGCA TTTGTGAAAA (2) 33.8 0.0338 P6.5 retina CCCCCAATTC CCCCCAATTT GGGCAGGGGA (2) TTCAAGAAGT (2) TTGATTAGCA TTGGAAGCTC TTTGTGAAAA (2) 85 0.085 P10.5 crx- retina CCCCCAATTC CCCCCAATTT GGGCAGGGGA (2) TGGGGCACTC TTCTGTGTAT TTGATTAGCA 67.1 0.0671 P10.5 crx+ retina CCCCCAATTC CCCCCAATTT GGGCAGGGGA (2) TTGATTAGCA 69.1 0.0691 Adult retinal CCCCCAATTC CCCCCAATTT GGGCAGGGGA (2) TGGGGCACTC 77.7 0.0777 ONL CCCCCAATTC TTCAAGAAGT (2) TTGATTAGCA TTGGAAGCTC 32.5 0.0325