Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.286600	Rhpn2	rhophilin, Rho GTPase binding protein 2	7	7 11.0 cM	52428
Gene Ontology	intracellular | intracellular signaling cascade | signal transduction
Human Homolog	RHPN2[rhophilin, Rho GTPase binding protein 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 39 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC ACTTTATTTA (6) 1.6 0.0016 P8 Cb GC TTCATTGTTT (3) 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma ACTTTATTTA (6) 4.6 0.0046 Cb medulloblastoma ATTTTTTTTA (10) 2.3 0.0023 Cb medulloblastoma TTCATTGTTT (3) 2.3 0.0023 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture ACTTTATTTA (6) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture ATTTTTTTTA (10) 2.3 0.0023 P8 GC+SHH+1d culture ACTTTATTTA (6) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus ACTTTATTTA (6) 3.6 0.0036 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina ATTTTTTTTA (10) 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina ACTTTATTTA (6) 1.8 0.0018 E14.5 retina TTCATTGTTT (3) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina ACTTTATTTA (6) 1.8 0.0018 E16.5 retina TTCATTGTTT (3) 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina ACTTTATTTA (6) 5.5 0.0055 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina ACTTTATTTA (6) 1.7 0.0017 P6.5 retina TTCATTGTTT (3) 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina ACTTTATTTA (6) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina TTCATTGTTT (3) 3.8 0.0038 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 ONL TGGTTGCTGG (369) 398.4 0.3984