| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ACCTTTACTG AGTGGCTACC (2) GAAACAGAGG GGGGCCCTGG (3)
| 9.7 | 0.0097 |
| Cb medulloblastoma | AGTGGCTACC (2) CATTTTACAT (2) GGGGCCCTGG (3)
| 11.5 | 0.0115 |
| P8 GC+1d culture | ACCTTTACTG CATTTTACAT (2)
| 6.9 | 0.0069 |
| P8 GC+SHH+1d culture | ACCTTTACTG CATTTTACAT (2)
| 11.7 | 0.0117 |
| 3T3 fibroblasts | ACCTTTACTG AGTGGCTACC (2)
| 7 | 0.007 |
| E15 cortex | ACCTTTACTG AGTGGCTACC (2)
| 9.8 | 0.0098 |
| P1 cortex | ACCTTTACTG
| 9.1 | 0.0091 |
| Hypothalamus | ACCTTTACTG CATTTTACAT (2) GGGGCCCTGG (3)
| 9 | 0.009 |
| E12.5 retina | ACCTTTACTG AGTGGCTACC (2) GAAACAGAGG
| 7.6 | 0.0076 |
| E14.5 retina | ACCTTTACTG CATTTTACAT (2) GGGGCCCTGG (3)
| 5.4 | 0.0054 |
| E16.5 retina | ACCTTTACTG CATTTTACAT (2)
| 3.6 | 0.0036 |
| P0.5 retina | ACCTTTACTG CATTTTACAT (2)
| 5.9 | 0.0059 |
| P4.5 retina | ACCTTTACTG CATTTTACAT (2) GGGGCCCTGG (3)
| 6 | 0.006 |
| P6.5 retina | ACCTTTACTG CATTTTACAT (2)
| 11.7 | 0.0117 |
| P10.5 crx- retina | ACCTTTACTG CATTTTACAT (2)
| 16.8 | 0.0168 |
| P10.5 crx+ retina | ACCTTTACTG CATTTTACAT (2) GGGGCCCTGG (3)
| 9.6 | 0.0096 |
| Adult retinal | ACCTTTACTG AGTGGCTACC (2) CATTTTACAT (2) GAAACAGAGG GGGGCCCTGG (3)
| 16.8 | 0.0168 |
| ONL | ACCTTTACTG CATTTTACAT (2)
| 3.8 | 0.0038 |