Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28688	Sars1	seryl-aminoacyl-tRNA synthetase 1	3	3 55.7 cM	20226
Gene Ontology	ATP binding | ligase activity | protein biosynthesis | serine-tRNA ligase activity | seryl-tRNA aminoacylation | tRNA aminoacylation for protein translation | tRNA ligase activity
Human Homolog	SARS[seryl-tRNA synthetase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 57 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACAATAAGTC 3.3 0.0033 P8 Cb GC AAGGCAGCAA (2) 1.6 0.0016 P8 Cb GC AGAAAATCAG (8) 1.6 0.0016 Cb medulloblastoma GAGGTCACTG (2) 4.6 0.0046 Cb medulloblastoma ACAATAAGTC 2.3 0.0023 Cb medulloblastoma AGAAAATCAG (8) 2.3 0.0023 Cb medulloblastoma CAGGAAAGTG (3) 2.3 0.0023 Cb medulloblastoma TGGACCTGGT 2.3 0.0023 P8 GC+1d culture GAGGTCACTG (2) 12.6 0.0126 P8 GC+1d culture AGAAAATCAG (8) 3.4 0.0034 P8 GC+1d culture AAGGCAGCAA (2) 1.1 0.0011 P8 GC+SHH+1d culture GAGGTCACTG (2) 7 0.007 P8 GC+SHH+1d culture TGGACCCTGT (6) 3.5 0.0035 P8 GC+SHH+1d culture CAGGAAAGTG (3) 1.2 0.0012 P8 GC+SHH+1d culture CCAAAACAAA (8) 1.2 0.0012 3T3 fibroblasts GAGGTCACTG (2) 49.1 0.0491 3T3 fibroblasts TGGACCTGGT 3.5 0.0035 E15 cortex GAGGTCACTG (2) 54.4 0.0544 P1 cortex GAGGTCACTG (2) 18.2 0.0182 P1 cortex CAGGAAAGTG (3) 4.5 0.0045 P1 cortex CCAAAACAAA (8) 4.5 0.0045 Hypothalamus GAGGTCACTG (2) 7.2 0.0072 Hypothalamus AACTCCCTCA (3) 1.8 0.0018 Hypothalamus AGAAAATCAG (8) 1.8 0.0018 E12.5 retina AGAAAATCAG (8) 3.8 0.0038 E12.5 retina GAGGTCACTG (2) 3.8 0.0038 E12.5 retina TGGACCCTGT (6) 3.8 0.0038 E14.5 retina AAGGCAGCAA (2) 3.6 0.0036 E14.5 retina AGAAAATCAG (8) 3.6 0.0036 E14.5 retina CCAAAACAAA (8) 1.8 0.0018 E14.5 retina GAGGTCACTG (2) 1.8 0.0018 E14.5 retina TGGACCCTGT (6) 1.8 0.0018 E14.5 retina TGGACCTGGT 1.8 0.0018 E16.5 retina TGGACCCTGT (6) 7.2 0.0072 E16.5 retina CAGGAAAGTG (3) 1.8 0.0018 E18.5 retina TGGACCCTGT (6) 3.6 0.0036 E18.5 retina AGAAAATCAG (8) 1.8 0.0018 P0.5 retina GAGGTCACTG (2) 3.9 0.0039 P0.5 retina CCAAAACAAA (8) 2 0.002 P0.5 retina TGGACCCTGT (6) 2 0.002 P2.5 retina GAGGTCACTG (2) 3.5 0.0035 P2.5 retina AGAAAATCAG (8) 1.8 0.0018 P2.5 retina CCAAAACAAA (8) 1.8 0.0018 P4.5 retina GAGGTCACTG (2) 4 0.004 P4.5 retina TGGACCCTGT (6) 4 0.004 P4.5 retina AACTCCCTCA (3) 2 0.002 P4.5 retina AGAAAATCAG (8) 2 0.002 P6.5 retina GAGGTCACTG (2) 8.3 0.0083 P10.5 crx- retina GAGGTCACTG (2) 11.1 0.0111 P10.5 crx- retina AAGGCAGCAA (2) 1.9 0.0019 P10.5 crx+ retina GAGGTCACTG (2) 7.7 0.0077 P10.5 crx+ retina AGAAAATCAG (8) 3.8 0.0038 P10.5 crx+ retina CAGGAAAGTG (3) 1.9 0.0019 P10.5 crx+ retina CCAAAACAAA (8) 1.9 0.0019 Adult retinal GAGGTCACTG (2) 5.6 0.0056 Adult retinal AACTCCCTCA (3) 1.9 0.0019 ONL GAGGTCACTG (2) 13.4 0.0134