Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.287208
BC017133
cDNA sequence BC017133
6
232164
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 73 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCTTAAAAAT
(
6
)
9.8
0.0098
P8 Cb GC
AATCTGAAAA (
5
)
4.9
0.0049
P8 Cb GC
AAAGAGTATG (
3
)
1.6
0.0016
P8 Cb GC
GCCTTAAAAA (
9
)
1.6
0.0016
Cb medulloblastoma
GCTTAAAAAT
(
6
)
16.2
0.0162
Cb medulloblastoma
AATCTGAAAA (
5
)
6.9
0.0069
Cb medulloblastoma
AAAGAGTATG (
3
)
2.3
0.0023
P8 GC+1d culture
GCTTAAAAAT
(
6
)
12.6
0.0126
P8 GC+1d culture
AATCTGAAAA (
5
)
4.6
0.0046
P8 GC+1d culture
TCATTCTTTA (
2
)
1.1
0.0011
P8 GC+SHH+1d culture
GCTTAAAAAT
(
6
)
17.6
0.0176
P8 GC+SHH+1d culture
AATCTGAAAA (
5
)
3.5
0.0035
P8 GC+SHH+1d culture
AGGTCAGGCT
1.2
0.0012
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
E15 cortex
GGGGGCTGCT (
3
)
9.9
0.0099
E15 cortex
AATCTGAAAA (
5
)
4.9
0.0049
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
P1 cortex
AAAGAGTATG (
3
)
4.5
0.0045
Hypothalamus
GCTTAAAAAT
(
6
)
7.2
0.0072
Hypothalamus
AATCTGAAAA (
5
)
3.6
0.0036
Hypothalamus
AGGTCAGGCT
1.8
0.0018
Hypothalamus
GCCTTAAAAA (
9
)
1.8
0.0018
Hypothalamus
TCATTCTTTA (
2
)
1.8
0.0018
E12.5 retina
AGGTCAGGCT
3.8
0.0038
E12.5 retina
GCTTAAAAAT
(
6
)
3.8
0.0038
E12.5 retina
AAAGAGTATG (
3
)
1.9
0.0019
E12.5 retina
AATAATTCCT
(
3
)
1.9
0.0019
E12.5 retina
AATCTGAAAA (
5
)
1.9
0.0019
E12.5 retina
AATCTGAAGA
1.9
0.0019
E12.5 retina
TCATTCTTTA (
2
)
1.9
0.0019
E14.5 retina
GCTTAAAAAT
(
6
)
21.9
0.0219
E14.5 retina
AATCTGAAAA (
5
)
12.8
0.0128
E14.5 retina
AAAGAGTATG (
3
)
1.8
0.0018
E16.5 retina
GCTTAAAAAT
(
6
)
12.7
0.0127
E16.5 retina
AATCTGAAAA (
5
)
10.9
0.0109
E16.5 retina
TGGATGGAAA
(
6
)
1.8
0.0018
E18.5 retina
GCTTAAAAAT
(
6
)
20
0.02
E18.5 retina
AATCTGAAAA (
5
)
16.4
0.0164
E18.5 retina
AAAGAGTATG (
3
)
3.6
0.0036
E18.5 retina
GCCTTAAAAA (
9
)
1.8
0.0018
E18.5 retina
GGGGGCTGCT (
3
)
1.8
0.0018
P0.5 retina
AAAGAGTATG (
3
)
9.8
0.0098
P0.5 retina
AATCTGAAAA (
5
)
3.9
0.0039
P0.5 retina
GCTTAAAAAT
(
6
)
3.9
0.0039
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P0.5 retina
AATAATTCCT
(
3
)
2
0.002
P2.5 retina
GCTTAAAAAT
(
6
)
10.6
0.0106
P2.5 retina
AATCTGAAAA (
5
)
5.3
0.0053
P2.5 retina
TGGATGGAAA
(
6
)
3.5
0.0035
P2.5 retina
GCCTTAAAAA (
9
)
1.8
0.0018
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P4.5 retina
AATCTGAAAA (
5
)
9.9
0.0099
P4.5 retina
GCTTAAAAAT
(
6
)
5.9
0.0059
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P6.5 retina
GCTTAAAAAT
(
6
)
11.7
0.0117
P6.5 retina
AATCTGAAAA (
5
)
8.3
0.0083
P6.5 retina
TGTTATGCAA
(
3
)
5
0.005
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P6.5 retina
AATAATTCCT
(
3
)
1.7
0.0017
P6.5 retina
AATCTGAAGA
1.7
0.0017
P6.5 retina
GCCTTAAAAA (
9
)
1.7
0.0017
P10.5 crx- retina
GCTTAAAAAT
(
6
)
5.6
0.0056
P10.5 crx- retina
AATCTGAAAA (
5
)
1.9
0.0019
P10.5 crx+ retina
AATCTGAAAA (
5
)
7.7
0.0077
Adult retinal
AATCTGAAGA
3.7
0.0037
Adult retinal
AAAGAGTATG (
3
)
1.9
0.0019
Adult retinal
GCTTAAAAAT
(
6
)
1.9
0.0019
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
Adult retinal
TGTTATGCAA
(
3
)
1.9
0.0019
ONL
AATCTGAAAA (
5
)
5.7
0.0057
ONL
GTCATAGCTG (
590
)
5.7
0.0057
ONL
AAAGAGTATG (
3
)
1.9
0.0019
ONL
GCTTAAAAAT
(
6
)
1.9
0.0019
