Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.287359	Zfyve27	zinc finger, FYVE domain containing 27	19		319740
Gene Ontology	extracellular space | integral to membrane
Human Homolog	ZFYVE27[zinc finger, FYVE domain containing 27]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 113 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC TGTGTGTGTG (115) 27.7 0.0277 P8 Cb GC AAATAAATAA (8) 3.3 0.0033 P8 Cb GC GACCAAAAAA (7) 3.3 0.0033 P8 Cb GC CTTAAAAAAA (12) 1.6 0.0016 P8 Cb GC GGCTGGACCC (3) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma TGTGTGTGTG (115) 30.1 0.0301 Cb medulloblastoma CTTAAAAAAA (12) 9.2 0.0092 Cb medulloblastoma GACCAAAAAA (7) 6.9 0.0069 Cb medulloblastoma AAATAAATAA (8) 4.6 0.0046 Cb medulloblastoma CCACAGAACA (2) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture TGTGTGTGTG (115) 27.4 0.0274 P8 GC+1d culture AAATAAATAA (8) 3.4 0.0034 P8 GC+1d culture CTTAAAAAAA (12) 3.4 0.0034 P8 GC+1d culture GACCAAAAAA (7) 1.1 0.0011 P8 GC+1d culture GGTGTGGTGC (2) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture TGTGTGTGTG (115) 28.1 0.0281 P8 GC+SHH+1d culture AAATAAATAA (8) 9.4 0.0094 P8 GC+SHH+1d culture CTTAAAAAAA (12) 5.9 0.0059 P8 GC+SHH+1d culture GACCAAAAAA (7) 4.7 0.0047 P8 GC+SHH+1d culture GGCTGGACCC (3) 3.5 0.0035 P8 GC+SHH+1d culture CTTATGGTTT (2) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts TGTGTGTGTG (115) 28 0.028 3T3 fibroblasts GGCTGGACCC (3) 7 0.007 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex CAGGGCCTGG (5) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex TGTGTGTGTG (115) 18.2 0.0182 P1 cortex GGCTGGACCC (3) 9.1 0.0091 P1 cortex CAGGGCCTGG (5) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus TGTGTGTGTG (115) 25.4 0.0254 Hypothalamus AAATAAATAA (8) 10.9 0.0109 Hypothalamus CTTAAAAAAA (12) 10.9 0.0109 Hypothalamus GACCAAAAAA (7) 3.6 0.0036 Hypothalamus GGTGTGGTGC (2) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina TGTGTGTGTG (115) 43.2 0.0432 E12.5 retina AAATAAATAA (8) 7.5 0.0075 E12.5 retina CTTAAAAAAA (12) 1.9 0.0019 E12.5 retina GGCTGGACCC (3) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina TGTGTGTGTG (115) 54.7 0.0547 E14.5 retina AAATAAATAA (8) 10.9 0.0109 E14.5 retina CTTAAAAAAA (12) 10.9 0.0109 E14.5 retina GACCAAAAAA (7) 1.8 0.0018 E14.5 retina GGTGTGGTGC (2) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina TGTGTGTGTG (115) 39.8 0.0398 E16.5 retina AAATAAATAA (8) 1.8 0.0018 E16.5 retina CTTAAAAAAA (12) 1.8 0.0018 E16.5 retina GACCAAAAAA (7) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina TGTGTGTGTG (115) 47.3 0.0473 E18.5 retina AAATAAATAA (8) 18.2 0.0182 E18.5 retina CTTAAAAAAA (12) 7.3 0.0073 E18.5 retina GACCAAAAAA (7) 7.3 0.0073 E18.5 retina CAGGGCCTGG (5) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina TGTGTGTGTG (115) 21.6 0.0216 P0.5 retina AAATAAATAA (8) 2 0.002 P0.5 retina CTTAAAAAAA (12) 2 0.002 P0.5 retina CTTATGGTTT (2) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina TGTGTGTGTG (115) 35.2 0.0352 P2.5 retina CTTAAAAAAA (12) 14.1 0.0141 P2.5 retina AAATAAATAA (8) 3.5 0.0035 P2.5 retina CCACAGAACA (2) 1.8 0.0018 P2.5 retina CTTATGGTTT (2) 1.8 0.0018 P2.5 retina GACCAAAAAA (7) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina TGTGTGTGTG (115) 47.6 0.0476 P4.5 retina AAATAAATAA (8) 7.9 0.0079 P4.5 retina GACCAAAAAA (7) 4 0.004 P4.5 retina CTTAAAAAAA (12) 2 0.002 P4.5 retina CTTATGGTTT (2) 2 0.002 P4.5 retina GGCTGGACCC (3) 2 0.002 P4.5 retina TGACCAGGAC 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina TGTGTGTGTG (115) 41.7 0.0417 P6.5 retina GACCAAAAAA (7) 10 0.01 P6.5 retina AAATAAATAA (8) 3.3 0.0033 P6.5 retina CCACAGAACA (2) 3.3 0.0033 P6.5 retina CTTAAAAAAA (12) 3.3 0.0033 P6.5 retina GGCTGGACCC (3) 1.7 0.0017 P6.5 retina GGTGTGGTGC (2) 1.7 0.0017 P10.5 crx- retina TGTGTGTGTG (115) 59.4 0.0594 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina AAATAAATAA (8) 3.7 0.0037 P10.5 crx- retina CTTAAAAAAA (12) 1.9 0.0019 P10.5 crx- retina TGACCAGGAC 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina TGTGTGTGTG (115) 44.2 0.0442 P10.5 crx+ retina GACCAAAAAA (7) 7.7 0.0077 P10.5 crx+ retina CTTAAAAAAA (12) 5.8 0.0058 P10.5 crx+ retina AAATAAATAA (8) 3.8 0.0038 P10.5 crx+ retina CCACAGAACA (2) 1.9 0.0019 P10.5 crx+ retina CTTATGGTTT (2) 1.9 0.0019 P10.5 crx+ retina GGCTGGACCC (3) 1.9 0.0019 P10.5 crx+ retina TGACCAGGAC 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal TGTGTGTGTG (115) 53.7 0.0537 Adult retinal GACCAAAAAA (7) 7.4 0.0074 Adult retinal GGCTGGACCC (3) 3.7 0.0037 Adult retinal CTTAAAAAAA (12) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL AAATAAATAA (8) 26.8 0.0268 ONL TGTGTGTGTG (115) 23 0.023 ONL GACCAAAAAA (7) 5.7 0.0057